Items where City Author is "Karabag, Cefa"
Article
Karabağ, C. 
ORCID: 0000-0003-4424-0471, Ortega-Ruiz, M. A. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2023).
Impact of Training Data, Ground Truth and Shape Variability in the Deep Learning-Based Semantic Segmentation of HeLa Cells Observed with Electron Microscopy.
Journal of Imaging, 9(3),
article number 59.
doi: 10.3390/jimaging9030059
Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2021).
Volumetric Semantic Instance Segmentation of the Plasma Membrane of HeLa Cells.
Journal of Imaging, 7(6),
article number 93.
doi: 10.3390/jimaging7060093
Ananda, A., Ngan, K. H. ORCID: 0000-0001-7623-942X, Karabağ, C. ORCID: 0000-0003-4424-0471 , Ter-Sarkisov, A., Alonso, E. ORCID: 0000-0002-3306-695X & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2021).
Classification and Visualisation of Normal and Abnormal Radiographs: a comparison between Eleven Convolutional Neural Network Architectures.
Sensors, 21(16),
article number 5381.
doi: 10.3390/s21165381
Ortega-Ruiz, M. A., Karabağ, C. ORCID: 0000-0003-4424-0471, Garduño, V. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020).
Morphological Estimation of Cellularity on Neo-Adjuvant Treated Breast Cancer Histological Images.
Journal of Imaging, 6(10),
article number 101.
doi: 10.3390/jimaging6100101
Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020).
Semantic segmentation of HeLa cells: An objective comparison between one traditional algorithm and four deep-learning architectures.
PLOS ONE, 15(10),
article number e0230605.
doi: 10.1371/journal.pone.0230605
Karabağ, C. ORCID: 0000-0003-4424-0471, Verhoeven, J. ORCID: 0000-0002-0738-8517, Miller, N. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019).
Texture Segmentation: An Objective Comparison between Five Traditional Algorithms and a Deep-Learning U-Net Architecture.
Applied Sciences, 9(18),
article number 3900.
doi: 10.3390/app9183900
Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019).
Segmentation and Modelling of the Nuclear Envelope of HeLa Cells Imaged with Serial Block Face Scanning Electron Microscopy.
Journal of Imaging, 5(9),
article number 75.
doi: 10.3390/jimaging5090075
Karabağ, C. ORCID: 0000-0003-4424-0471, Verhoeven, J. ORCID: 0000-0002-0738-8517, Miller, N. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019).
Texture Segmentation: An Objective Comparison between Traditional and Deep-Learning Methodologies.
Preprints,
doi: 10.20944/preprints201908.0001.v1
Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019).
Segmentation and modelling of hela nuclear envelope.
2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019),
pp. 1510-1513.
doi: 10.1109/ISBI.2019.8759151
Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2018).
Automated Segmentation of HeLa Nuclear Envelope from Electron Microscopy Images.
Communications in Computer and Information Science,
doi: 10.1007/978-3-319-95921-4_23
Conference or Workshop Item
Ananda, Karabağ, C. ORCID: 0000-0003-4424-0471, Ter-Sarkisov, A. ORCID: 0000-0002-1300-6132 , Alonso, E. ORCID: 0000-0002-3306-695X & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020).
Radiography Classification: A comparison between Eleven Convolutional Neural Networks.
In:
2020 Fourth International Conference on Multimedia Computing, Networking and Applications (MCNA).
2020 Fourth International Conference on Multimedia Computing, Networking and Applications (MCNA), 19-22 Oct 2020, Online.
doi: 10.1109/MCNA50957.2020.9264285
Other
Ortega-Ruiz, M. A., Karabağ, C. ORCID: 0000-0003-4424-0471, García Garduño, V. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020).
Morphological estimation of Cellularity on Neo-adjuvant treated breast cancer histological images.
doi: 10.1101/2020.04.01.020719
Ortega-Ruiz, M. A., Karabağ, C. ORCID: 0000-0003-4424-0471, Garduño, V. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2011).
Estimation of cellularity in tumours treated with Neoadjuvant therapy: A comparison of Machine Learning algorithms.
doi: 10.1101/2020.04.09.034348
Thesis
Karabağ, C. ORCID: 0000-0003-4424-0471 (2020).
Volumetric analysis of HeLa cancer cells imaged with serial block face scanning electron microscopy.
(Unpublished Doctoral thesis, City, University of London)