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Items where City Author is "Reyes-Aldasoro, Constantino"

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Ascencio-Cabral, A. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2022). Comparison of Convolutional Neural Networks and Transformers for the Classification of Images of COVID-19, Pneumonia and Healthy Individuals as Observed with Computed Tomography. Journal of Imaging, 8(9), 237. doi: 10.3390/jimaging8090237

Chow, B. H. Y. & Reyes Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2021). Automatic Gemstone Classification Using Computer Vision. Minerals, 12(1), doi: 10.3390/min12010060

D’amato, E., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Consiglio, A. , D’amato, G., Faienza, M. F. & Zollino, M. (2021). Detection of Pitt–Hopkins syndrome based on morphological facial features. Applied Sciences, 11(24), 12086. doi: 10.3390/app112412086

Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2021). Volumetric Semantic Instance Segmentation of the Plasma Membrane of HeLa Cells. Journal of Imaging, 7(6), 93. doi: 10.3390/jimaging7060093

Ananda, A., Ngan, K. H. ORCID: 0000-0001-7623-942X, Karabağ, C. ORCID: 0000-0003-4424-0471 , Ter-Sarkisov, A., Alonso, E. ORCID: 0000-0002-3306-695X & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2021). Classification and Visualisation of Normal and Abnormal Radiographs: a comparison between Eleven Convolutional Neural Network Architectures. Sensors, 21(16), 5381. doi: 10.3390/s21165381

Jaffari, R., Hashmani, M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2021). A Novel Focal Phi Loss for Power Line Segmentation with Auxiliary Classifier U-Net. Sensors, 21(8), 2803. doi: 10.3390/s21082803

Madabhushi, A. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2021). Special Issue on Computational Pathology: An Overview. Medical Image Analysis, 73, 102151. doi: 10.1016/j.media.2021.102151

Mitchell, C. J., Caroff, L., Solis-Lemus, J. A. , Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Vigilante, A., Warburton, F., de Chaumont, F., Dufour, A., Dallongeville, S., Olivo-Marin, J-C. & Knight, R. (2020). Cell Tracking Profiler: a user-driven analysis framework for evaluating 4D live cell imaging data. Journal of Cell Science (JCS), 133(22), jcs241422. doi: 10.1242/jcs.241422

Solís-Lemus, J. A., Sánchez-Sánchez, B. J., Marcotti, S. , Burki, M., Stramer, B. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection. Journal of Imaging, 6(5), 36. doi: 10.3390/jimaging6050036

Bianconi, F., Kather, J. N. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Experimental Assessment of Color Deconvolution and Color Normalization for Automated Classification of Histology Images Stained with Hematoxylin and Eosin. Cancers, 12(11), 3337. doi: 10.3390/cancers12113337

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Ngan, K. H., Ananda, A. , d’Avila Garcez, A., Appelboam, A. & Knapp, K. M. (2020). Geometric semi-automatic analysis of radiographs of Colles’ fractures. PLoS One, 15(9), e0238926. doi: 10.1371/journal.pone.0238926

Ortega-Ruiz, M. A., Karabağ, C. ORCID: 0000-0003-4424-0471, Garduño, V. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Morphological Estimation of Cellularity on Neo-Adjuvant Treated Breast Cancer Histological Images. Journal of Imaging, 6(10), 101. doi: 10.3390/jimaging6100101

Stiff, T., Echegaray-Iturra, F. R., Pink, H. J. , Herbert, A., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Hochegger, H. (2020). Prophase-Specific Perinuclear Actin Coordinates Centrosome Separation and Positioning to Ensure Accurate Chromosome Segregation. Cell Reports, 31(8), 107681. doi: 10.1016/j.celrep.2020.107681

Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Semantic segmentation of HeLa cells: An objective comparison between one traditional algorithm and four deep-learning architectures. PLOS ONE, 15(10), e0230605. doi: 10.1371/journal.pone.0230605

Karabağ, C. ORCID: 0000-0003-4424-0471, Verhoeven, J. ORCID: 0000-0002-0738-8517, Miller, N. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). Texture Segmentation: An Objective Comparison between Five Traditional Algorithms and a Deep-Learning U-Net Architecture. Applied Sciences, 9, 3900. doi: 10.3390/app9183900

Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). Segmentation and Modelling of the Nuclear Envelope of HeLa Cells Imaged with Serial Block Face Scanning Electron Microscopy. Journal of Imaging, 5(9), 0.75. doi: 10.3390/jimaging5090075

Pazhakh, V., Ellett, F., Croker, B. A. , O'Donnell, J. A., Pase, L., Schulze, K. E., Greulich, R. S., Gupta, A., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Andrianopoulos, A. & Lieschke, G. J. (2019). β-glucan-dependent shuttling of conidia from neutrophils to macrophages occurs during fungal infection establishment. PLoS Biology, 17(9), e3000113. doi: 10.1371/journal.pbio.3000113

Karabağ, C. ORCID: 0000-0003-4424-0471, Verhoeven, J. ORCID: 0000-0002-0738-8517, Miller, N. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). Texture Segmentation: An Objective Comparison between Traditional and Deep-Learning Methodologies. Preprints, doi: 10.20944/preprints201908.0001.v1

Verhoeven, J. ORCID: 0000-0002-0738-8517, Miller, N. R., Daems, L. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). Visualisation and Analysis of Speech Production with Electropalatography. Journal of Digital Imaging, 5(3), 40. doi: 10.3390/jimaging5030040

Kather, J. N., Krisam, J., Charoentong, P. , Luedde, T., Herpel, E., Weis, C. A., Gaiser, T., Marx, A., Valous, N. A., Ferber, D., Jansen, L., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Zörnig, I., Jäger, D., Brenner, H., Chang-Claude, J., Hoffmeister, M. & Halama, N. (2019). Predicting survival from colorectal cancer histology slides using deep learning: A retrospective multicenter study. PLoS Med, 16(1), e1002730. doi: 10.1371/journal.pmed.1002730

Solis-Lemus, J. A., Stramer, B., Slabaugh, G. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). MacroSight: A novel framework to analyze the shape and movement of interacting macrophages using MAtLABR †. Journal of Imaging, 5(1), 17. doi: 10.3390/jimaging5010017

Nouri, J. M. ORCID: 0000-0001-8610-3737, Vasilakos, I., Yan, Y. ORCID: 0000-0003-1124-4724 & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). Effect of Viscosity and Speed on Oil Cavitation Development in a Single Piston-Ring Lubricant Assembly. Lubricants, 7(10), 88. doi: 10.3390/lubricants7100088

Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). Segmentation and modelling of hela nuclear envelope. 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), pp. 1510-1513. doi: 10.1109/ISBI.2019.8759151

Slabaugh, G. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2018). Guest Editorial: Computer Vision in Cancer Data Analysis. IET Computer Vision, 12(8), pp. 1047-1048. doi: 10.1049/iet-cvi.2018.5606

Solis-Lemus, J. A., Stramer, B., Slabaugh, G. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2018). Analysis of the Interactions of Migrating Macrophages. Communications in Computer and Information Science, 2018, pp. 262-273. doi: 10.1007/978-3-319-95921-4_25

Miller, N. R., Verhoeven, J. ORCID: 0000-0002-0738-8517 & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2018). Analysis of the symmetry of electrodes for Electropalatography with Cone Beam CT Scanning. Communications in Computer and Information Science, 2018, pp. 130-139. doi: 10.1007/978-3-319-95921-4_14

Karabağ, C. ORCID: 0000-0003-4424-0471, Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2018). Automated Segmentation of HeLa Nuclear Envelope from Electron Microscopy Images. Communications in Computer and Information Science, doi: 10.1007/978-3-319-95921-4_23

Leandrou, S., Mamais, I., Petroudi, S. , Kyriacou, P. A. ORCID: 0000-0002-2868-485X, Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Pattichis, C. S. (2018). Hippocampal and entorhinal cortex volume changes in Alzheimer's disease patients and mild cognitive impairment subjects.. BHI, pp. 235-238. doi: 10.1109/BHI.2018.8333412

Kather, J. N., Berghoff, A. S., Ferber, D. , Suarez-Carmona, M., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Valous, N. A., Rojas-Moraleda, R., Jäger, D. & Halama, N. (2018). Large-scale database mining reveals hidden trends and future directions for cancer immunotherapy. OncoImmunology, doi: 10.1080/2162402X.2018.1444412

Leandrou, S., Petroudi, S., Reyes-Aldasoro, C. C. , Kyriacou, P. A. & Pattichis, C. S. (2018). Quantitative MRI Brain Studies in Mild Cognitive Impairment and Alzheimer's disease: A Methodological Review. IEEE Reviews in Biomedical Engineering, PP(99), doi: 10.1109/RBME.2018.2796598

Jawaid, M. M., Narejo, S., Pirzada, N. , Baloch, J., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Slabaugh, G. G. (2018). Automated quantification of non-calcified coronary plaques in cardiac CT angiographic imagery. International Journal of Advanced Computer Science and Applications, 9(7), pp. 216-222. doi: 10.14569/IJACSA.2018.090731

Solis-Lemus, J. A., Stramer, B., Slabaugh, G. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2018). Shape analysis and tracking of migrating macrophages. 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018), pp. 1006-1009. doi: 10.1109/ISBI.2018.8363741

Solis-Lemus, J. A., Stramer, B., Slabaugh, G. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2017). Segmentation and Shape Analysis of Macrophages Using Anglegram Analysis. Journal of Imaging, 4(1), doi: 10.3390/jimaging4010002

Ulman, V., Maska, M., Magnusson, K. E. G. , Ronneberger, O., Haubold, C., Harder, N., Matula, P., Matula, P., Svoboda, D., Radojevic, M., Smal, I., Rohr, K., Jalden, J., Blau, H. M., Dzyubachyk, O., Lelieveldt, B., Xiao, P., Li, Y., Cho, S-Y., Dufour, A C., Olivo-Marin, J-C., Reyes-Aldasoro, C. C., Solis-Lemus, J. A., Bensch, R., Brox, T., Stegmaier, J., Mikut, R., Wolf, S., Hamprecht, F. A., Esteves, T., Quelhas, P., Demirel, O., Malmstrom, L., Jug, F., Tomancak, P., Meijering, E., Munoz-Barrutia, A., Kozubek, M. & Ortiz-de-Solorzano, C. (2017). An objective comparison of cell-tracking algorithms. Nature Methods, 14(12), pp. 1141-1152. doi: 10.1038/nmeth.4473

Reyes-Aldasoro, C. C. & Slabaugh, G. G. (2017). Special issue: medical image understanding and analysis. Computer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization, 5(5), 317. doi: 10.1080/21681163.2015.1081080

Jawaid, M. M., Rajani, R., Liatsis, P. , Reyes-Aldasoro, C. C. & Slabaugh, G. G. (2017). A Hybrid Energy Model for Region Based Curve Evolution - Application to CTA Coronary Segmentation. Computer Methods and Programs in Biomedicine, doi: 10.1016/j.cmpb.2017.03.020

Reyes-Aldasoro, C. C. (2017). The proportion of cancer-related entries in PubMed has increased considerably; is cancer truly "The Emperor of All Maladies"?. PLoS One, 12(3), e0173671. doi: 10.1371/journal.pone.0173671

Jawaid, M. M., Riaz, A., Rajani, R. , Reyes-Aldasoro, C. C. & Slabaugh, G. G. (2017). Framework for Detection and Localization of Coronary Non-Calcified Plaques in Cardiac CTA using Mean Radial Profiles. Computers in Biology and Medicine, 89, pp. 84-95. doi: 10.1016/j.compbiomed.2017.07.021

Reyes-Aldasoro, C. C., Björndahl, M. A., Kanthou, C. & Tozer, G. M. (2017). Topological analysis of the vasculature of angiopoietin-expressing tumours through scale-space tracing. Communications in Computer and Information Science, 723, pp. 285-296. doi: 10.1007/978-3-319-60964-5_25

Fonseca, J., Nadimi, S., Reyes-Aldasoro, C. C. , O’Sullivan, C. & Coop, M. R. (2016). Image-based investigation into the primary fabric of stress transmitting particles in sand. Soils and Foundations, 56(5), pp. 818-834. doi: 10.1016/j.sandf.2016.08.007

Foote, C. A., Castorena-Gonzalez, J. A., Ramirez-Perez, F. I. , Jia, G., Hill, M. A., Reyes-Aldasoro, C. C., Sowers, J. R. & Martinez-Lemus, L. A. (2016). Arterial stiffening in western diet-fed mice is associated with increased vascular elastin, transforming growth factor-ß, and plasma neuraminidase. Frontiers in Physiology, 7, 285. doi: 10.3389/fphys.2016.00285

Pennington, K. A., Ramirez-Perez, F. I., Pollock, K. E. , Talton, O. O., Foote, C. A., Reyes-Aldasoro, C. C., Wu, H-H., Ji, T., Martinez-Lemus, L. A. & Schulz, L. C. (2016). Maternal hyperleptinemia is associated with male offspring’s altered vascular function and structure in mice. PLOS One, 11(5), doi: 10.1371/journal.pone.0155377

Ramirez-Perez, F. I., Pennington, K. A., Pollock, K. E. , Esangbedo, O., Foote, C. A., Reyes-Aldasoro, C. C., Wu, H-H., Ji, T., Martinez-Lemus, L. A. & Schulz, L. C. (2016). Maternal Hyperleptinemia Increases Arterial Stiffening and Alters Vasodilatoy Responses to Insulin in Adult Male Mice Offspring. The FASEB Journal, 30(1), 721.8. doi: 10.1096/fasebj.30.1_supplement.721.8

Kather, N. J., Weis, C. A., Zöllner, F. G. & Reyes-Aldasoro, C. C. (2016). Mapping tumour tissue: quantitative maps of histological whole slide images. Oncology News, 10(6), pp. 188-190.

Green, R., Simoes, F. A., Reyes-Aldasoro, C. C. , Rossor, A. M., Scoto, M., Barri, M., Greensmith, L., Muntoni, F., Reilly, M. M. & Hafezparast, M. (2016). A DYNC1H1 mutation in autosomal dominant spinal muscular atrophy shows the potential of pharmacological inhibition of histone deacetylase 6 as a treatment for disease associated cellular phenotypes. Journal Of The Peripheral Nervous System, 21(3), pp. 261-262. doi: 10.1111/jns.12181

Leandrou, S., Petroudi, S., Kyriacou, P. A. , Reyes-Aldasoro, C. C. & Pattichis, C. S. (2015). An overview of quantitative magnetic resonance imaging analysis studies in the assessment of alzheimer’s disease. IFMBE Proceedings, 57, pp. 281-286. doi: 10.1007/978-3-319-32703-7_56

Bender, S. B., Castorena-Gonzalez, J. A., Garro, M. , Reyes-Aldasoro, C. C., Sowers, J. R., DeMarco, V. G. & Martinez-Lemus, L. A. (2015). Regional variation in arterial stiffening and dysfunction in western diet-induced obesity. AJP - Heart and Circulatory Physiology, 309(4), H574-H582. doi: 10.1152/ajpheart.00155.2015

Yin, T., Ali, F. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2015). A Robust and Artifact Resistant Algorithm of Ultrawideband Imaging System for Breast Cancer Detection. IEEE Trans Biomed Eng, 62(6), pp. 1514-1525. doi: 10.1109/TBME.2015.2393256

Kather, J. N., Marx, A., Reyes-Aldasoro, C. C. , Schad, L. R., Zöllner, F. G. & Weis, C. A. (2015). Continuous representation of tumor microvessel density and detection of angiogenic hotspots in histological whole-slide images. Oncotarget, 6(22), pp. 19163-19176. doi: 10.18632/oncotarget.4383

Llado, X., Imiya, A., Mason, D. , Reyes-Aldasoro, C. C., Aoki, K., Kudo, M., Zhang, Y. & Argyriou, V. (2015). Corrigendum to 'Homage to Professor Maria Petrou' [ Pattern Recognition Letters 48 (2014) 2-7].. Pattern Recognition Letters, 54(1), 109. doi: 10.1016/j.patrec.2015.01.006

Slabaugh, G. G. & Reyes-Aldasoro, C. C. (2015). Guest Editorial: Medical Image Understanding and Analysis. Annals of the British Machine Vision Association, 2015(1), pp. 1-2.

Blazakis, K. N., Madzvamuse, A., Reyes-Aldasoro, C. C. , Styles, V. & Venkataraman, C. (2015). Whole cell tracking through the optimal control of geometric evolution laws. Journal of Computational Physics, 297, pp. 495-514. doi: 10.1016/j.jcp.2015.05.014

Llado, X., Imiya, A., Reyes-Aldasoro, C. C. , Mason, D., Aoki, K., Kudo, M., Zhang, Y. & Argyriou, V. (2014). Homage to Professor Maria Petrou. Pattern Recognition Letters, 48, pp. 2-7. doi: 10.1016/j.patrec.2014.06.008

Kanthou, C., Dachs, G. U., Lefley, D. V. , Steele, A. J., Coralli-Foxon, C., Harris, S., Greco, O., Dos Santos, S. A., Reyes-Aldasoro, C. C., English, W. R. & Tozer, G. M. (2014). Tumour cells expressing single VEGF isoforms display distinct growth, survival and migration characteristics. PLoS One, 9(8), e104015. doi: 10.1371/journal.pone.0104015

Williams, L. J., Mukherjee, D., Fisher, M. , Reyes-Aldasoro, C. C., Akerman, S., Kanthou, C. & Tozer, G. M. (2014). An in vivo role for Rho kinase activation in the tumour vascular disrupting activity of combretastatin A-4 3-O-phosphate. British Journal of Pharmacology, 171(21), pp. 4902-4913. doi: 10.1111/bph.12817

Akerman, S., Fisher, M., Daniel, R. A. , Lefley, D. V., Reyes-Aldasoro, C. C., Lunt, S. J., Harris, S., Björndahl, M. A., Williams, L. J., Evans, H., Barber, P. R., Prise, V. E., Vojnovic, B., Kanthou, C. & Tozer, G. M. (2013). Influence of soluble or matrix-bound isoforms of vascular endothelial growth factor-A on tumor response to vascular-targeted strategies. International Journal of Cancer, 133(11), pp. 2563-2576. doi: 10.1002/ijc.28281

Reyes-Aldasoro, C. C. (2013). Cancer Image Analysis. Oncology News, 8(5), pp. 158-160.

Henry, K. M., Pase, L., Ramos-Lopez, C. F. , Lieschke, G. J., Renshaw, S. A. & Reyes-Aldasoro, C. C. (2013). PhagoSight: an open-source MATLAB® package for the analysis of fluorescent neutrophil and macrophage migration in a zebrafish model. PLoS One, 8(8), e72636. doi: 10.1371/journal.pone.0072636

Holmes, G. R., Anderson, S. R., Dixon, G. , Robertson, A. L., Reyes-Aldasoro, C. C., Billings, S. A., Renshaw, S. A. & Kadirkamanathan, V. (2012). Repelled from the wound, or randomly dispersed? Reverse migration behaviour of neutrophils characterized by dynamic modelling. Journal of The Royal Society, Interface, 9(77), pp. 3229-3239. doi: 10.1098/rsif.2012.0542

Reyes-Aldasoro, C. C., Björndahl, M. A., Akerman, S. , Ibrahim, J., Griffiths, M. K. & Tozer, G. M. (2012). Online chromatic and scale-space microvessel-tracing analysis for transmitted light optical images. Microvascular Research, 84(3), pp. 330-339. doi: 10.1016/j.mvr.2012.09.002

Pase, L., Layton, J. E., Wittmann, C. , Ellett, F., Nowell, C. J., Reyes-Aldasoro, C. C., Varma, S., Rogers, K. L., Hall, C. J., Keightley, M. C., Crosier, P. S., Grabher, C., Heath, J. K., Renshaw, S. A. & Lieschke, G. J. (2012). Neutrophil-delivered myeloperoxidase dampens the hydrogen peroxide burst after tissue wounding in zebrafish. Current Biology, 22(19), pp. 1818-1824. doi: 10.1016/j.cub.2012.07.060

Kadirkamanathan, V., Anderson, S. R., Billings, S. A. , Zhang, X., Holmes, G. R., Reyes-Aldasoro, C. C., Elks, P. M. & Renshaw, S. A. (2012). The neutrophil's eye-view: inference and visualisation of the chemoattractant field driving cell chemotaxis in vivo. PLoS One, 7(4), e35182. doi: 10.1371/journal.pone.0035182

Holmes, G. R., Dixon, G., Anderson, S. R. , Reyes-Aldasoro, C. C., Elks, P. M., Billings, S. A., Whyte, M., Kadirkamanathan, V. & Renshaw, S. A. (2012). Drift-Diffusion Analysis of Neutrophil Migration during Inflammation Resolution in a Zebrafish Model. Advances in Hematology, 2012, 792163. doi: 10.1155/2012/792163

Akerman, S., Reyes-Aldasoro, C. C., Fisher, M. , Pettyjohn, K. L., Björndahl, M. A., Evans, H. & Tozer, G. M. (2011). Microflow of fluorescently labelled red blood cells in tumours expressing single isoforms of VEGF and their response to vascular targeting agents. Medical Engineering & Physics, 33(7), pp. 805-809. doi: 10.1016/j.medengphy.2010.09.006

Elks, P. M., van Eeden, F. J., Dixon, G. , Wang, X., Reyes-Aldasoro, C. C., Ingham, P., Whyte, M., Walmsley, S. R. & Renshaw, S. A. (2011). Activation of hypoxia-inducible factor-1α (Hif-1α) delays inflammation resolution by reducing neutrophil apoptosis and reverse migration in a zebrafish inflammation model. Blood, 118(3), pp. 712-722. doi: 10.1182/blood-2010-12-324186

Reyes-Aldasoro, C. C., Williams, L. J., Akerman, S. , Kanthou, C. & Tozer, G. M. (2011). An automatic algorithm for the segmentation and morphological analysis of microvessels in immunostained histological tumour sections. Journal Of Microscopy, 242(3), pp. 262-278. doi: 10.1111/j.1365-2818.2010.03464.x

Lunt, S. J., Akerman, S., Hill, S. A. , Fisher, M., Wright, V. J., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Tozer, G. M. & Kanthou, C. (2011). Vascular effects dominate solid tumor response to treatment with combretastatin A-4-phosphate. International Journal of Cancer, 129(8), doi: 10.1002/ijc.25848

Williams, L. J., Fisher, M., Reyes-Aldasoro, C. C. , Kanthou, C. & Tozer, G. M. (2011). Abstract 1578: A critical role for RhoA-GTPase signaling in the tumor vascular disrupting action of combretastatin-A4-phosphate in vivo. Cancer Research, 71, p. 1578. doi: 10.1158/1538-7445.AM2011-1578

Tozer, G. M., Akerman, S., Cross, N. A. , Barber, P. R., Björndahl, M. A., Greco, O., Harris, S., Hill, S. A., Honess, D. J., Ireson, C. R., Pettyjohn, K. L., Prise, V. E., Reyes-Aldasoro, C. C., Ruhrberg, C., Shima, D. T. & Kanthou, C. (2011). Blood vessel maturation and response to vascular-disrupting therapy in single vascular endothelial growth factor-A isoform-producing tumors. Cancer Research, 68(7), pp. 2301-2311. doi: 10.1158/0008-5472.CAN-07-2011

Reyes-Aldasoro, C. C., Griffiths, M. K., Savas, D. & Tozer, G. M. (2010). CAIMAN: an online algorithm repository for Cancer Image Analysis. Computer Methods and Programs in Biomedicine, 103(2), pp. 97-103. doi: 10.1016/j.cmpb.2010.07.007

Reyes-Aldasoro, C. C. (2009). Retrospective shading correction algorithm based on signal envelope estimation. Electronics Letters, 45(9), pp. 454-456. doi: 10.1049/el.2009.0320

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Akerman, S. & Tozer, G.M. (2008). Measuring the velocity of fluorescently labelled red blood cells with a keyhole tracking algorithm.. Journal Of Microscopy, 229(Pt 1), pp. 162-173. doi: 10.1111/j.1365-2818.2007.01877.x

Reyes-Aldasoro, C. C., Wilson, I., Prise, V. E. , Barber, P. R., Ameer-Beg, M., Vojnovic, B., Cunningham, V. J. & Tozer, G. M. (2008). Estimation of apparent tumor vascular permeability from multiphoton fluorescence microscopic images of P22 rat sarcomas in vivo. Microcirculation, 15(1), pp. 65-79. doi: 10.1080/10739680701436350

Reyes-Aldasoro, C. C., Biram, D., Tozer, G. M. & Kanthou, C. (2008). Measuring cellular migration with image processing. Electronics Letters, 44(13), pp. 791-793.

Reyes-Aldasoro, C. C. & Bhalerao, A. (2007). Volumetric texture segmentation by discriminant feature selection and multiresolution classification. IEEE Transactions on Medical Imaging, 26(1), pp. 1-14. doi: 10.1109/TMI.2006.884637

Reyes-Aldasoro, C. C. & Bhalerao, A. (2006). The Bhattacharyya space for feature selection and its application to texture segmentation. Pattern Recognition, 39(5), pp. 812-826. doi: 10.1016/j.patcog.2005.12.003

Reyes-Aldasoro, C. C. & Bhalerao, A. (2003). Volumetric texture description and discriminant feature selection for MRI. Information Processing in Medical Imaging, 2732, pp. 282-293. doi: 10.1007/978-3-540-45087-0_24

Book Section

Ngan, K. H., d'Avila Garcez, A., Knapp, K. , Appelboam, A. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). A machine learning approach for Colles' fracture treatment diagnosis. In: Medical Image Understanding and Analysis: 24th Annual Conference, MIUA 2020, Oxford, UK, July 15-17, 2020, Proceedings. Communications in Computer and Information Science (1248). (pp. 319-330). Cham: Springer. doi: 10.1007/978-3-030-52791-4_25

Fonseca, J., Reyes-Aldasoro, C. C., O'Sullivan, C. & Coop, M. R. (2015). Experimental investigation into the primary fabric of stress transmitting particles. In: Soga, K., Kumar, K., Biscontin, G. & Kuo, M. (Eds.), Geomechanics from Micro to Macro. (pp. 1019-1024). London, UK: CRC Press.

Reyes-Aldasoro, C. C., Barri, M. & Hafezparast, M. (2015). Automatic segmentation of focal adhesions from mouse embryonic fibroblasts. In: 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI). (pp. 548-551). IEEE. doi: 10.1109/ISBI.2015.7163932

Tozer, G. M., Daniel, R. A., Lunt, S. J. , Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Cunningham, V. J. (2014). Haemodynamics and Oxygenation of the Tumor Microcirculation. In: Weigert, R. (Ed.), Advances in Intravital Microscopy. (pp. 125-141). Dordrecht, Netherlands: Springer Netherlands. doi: 10.1007/978-94-017-9361-2_6

Bowyer, S., Kanthou, C. & Reyes-Aldasoro, C. C. (2014). Analysis of capillary-like structures formed by endothelial cells in a novel organotypic assay developed from heart tissue. In: Reyes-Aldasoro, C. C. & Slabaugh, G. G. (Eds.), Medical Image Understanding and Analysis 2014. (pp. 226-231). London: British Machine Vision Association.

Conference or Workshop Item

Youssef, A. & Reyes Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2022). Computational Image Analysis Techniques, Programming Languages and Software Platforms Used in Cancer Research: A Scoping Review. In: Medical Image Understanding and Analysis. MIUA 2022. . Springer. ISBN 978-3-031-12052-7 doi: 10.1007/978-3-031-12053-4_61

Reece, J., Couvillon, M., Grüter, C. , Ratnieks, F. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Automatic Analysis of Bees’ Waggle Dance. Paper presented at the International Conference in Pattern Recognition, Workshop on Visual observation and analysis of Vertebrate And Insect Behavior, 11 January 2021, Milan, Italy.

Solí­s-Lemus, J., Sánchez-Sánchez, B. J., Marcotti, S. , Burki, M., Stramer, B. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Comparison of Interactions Between Control and Mutant Macrophages. In: Zheng, Y., Williams, B. M. & Chen, K. (Eds.), Medical Image Understanding and Analysis (MIUA 2019). (pp. 470-477). Cham, Switzerland: Springer. ISBN 9783030393427 doi: 10.1007/978-3-030-39343-4_40

Ananda, , Karabağ, C. ORCID: 0000-0003-4424-0471, Ter-Sarkisov, A. ORCID: 0000-0002-1300-6132 , Alonso, E. ORCID: 0000-0002-3306-695X & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Radiography Classification: A comparison between Eleven Convolutional Neural Networks. In: 2020 Fourth International Conference on Multimedia Computing, Networking and Applications (MCNA). (pp. 119-125). New York, USA: IEEE. ISBN 978-1-7281-8373-2 doi: 10.1109/MCNA50957.2020.9264285

Verhoeven, J. ORCID: 0000-0002-0738-8517, Marien, P., De Clerck, I. , Daems, L., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Miller, N. (2019). Asymmetries in speech articulation as reflected on palatograms: a meta-study. In: Calhoun, S., Escudero, P., Tabain, M. & Warren, P. (Eds.), Proceedings of the 19th International Congress of Phonetic Sciences, Melbourne, Australia 2019. (pp. 2821-2825). Canberra, Australia: Australasian Speech Science and Technology Association Inc.. ISBN 978-0-646-80069-1

Miller, N., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Verhoeven, J. ORCID: 0000-0002-0738-8517 (2019). Asymmetries in tongue-palate contact during speech. In: Calhoun, S., Escudero, P., Tabin, M. & Warren, P. (Eds.), Proceedings of the 19th International Congress of Phonetic Sciences. (pp. 1734-1738). Canberra, Australia: Australasian Speech Science and Technology Association Inc. ISBN 9780646800691

Bianconi, F., Kather, J. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). Evaluation of Colour Pre-processing on Patch-Based Classification of H&E-Stained Images. In: Digital Pathology. ECDP 2019. Lecture Notes in Computer Science, 11435. (pp. 56-64). Cham: Springer. ISBN 978-3-030-23936-7 doi: 10.1007/978-3-030-23937-4_7

Ilczyszyn, A., Ringrose, C., Goldsworthy, N. , Beresineviciute, L., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Appelboam, A. & Knapp, K. (2019). Colles’ Fractures: Intra- and Inter-operator precision of alignment measurements from projection radiographs pre- and post-manipulation under anaesthesia.. Poster presented at the UK Imaging & Oncology Congress 2019, 10-12 June 2019, Liverpool, UK.

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2019). Redesign of the assessment materials for the Module EE3517 Medical Imaging Modalities. Paper presented at the Learning at City Conference 2019: Promoting Student Success, 3 July 2019, London, UK.

Olliverre, N. J., Yang, G., Slabaugh, G. G. , Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Alonso, E. (2018). Generating Magnetic Resonance Spectroscopy Imaging Data of Brain Tumours from Linear, Non-Linear and Deep Learning Models. In: Simulation and Synthesis in Medical Imaging. Lecture Notes in Computer Science (11037). (pp. 130-138). Cham, Switzerland: Spirnger. ISBN 978-3-030-00535-1 doi: 10.1007/978-3-030-00536-8_14

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2018). Shape Analysis and Tracking of Migrating Macrophages. Poster presented at the IEEE International Symposium on Biomedical Imaging (ISBI), 4-7 Apr 2018, Washington, D.C., USA.

Reyes-Aldasoro, C. C. (2017). The proportion of cancer related entries in PubMed has increased considerably. Paper presented at the 2017 NCRI Conference, 5-8 Nov 2017, Liverpool, UK.

Jawaid, M. M., Rajani, R., Liatsis, P. , Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Slabaugh, G. G. (2017). Improved CTA Coronary Segmentation with a Volume-Specific Intensity Threshold. Paper presented at the Medical Image Understanding and Analysis (MIUA) 2017, 11 Jul 2017, Edinburgh, UK.

Solis Lemus, J., Stramer, B., Slabaugh, G. G. & Reyes-Aldasoro, C. C. (2017). Segmentation of Overlapping Macrophages Using Anglegram Analysis. Paper presented at the Medical Image Understanding and Analysis (MIUA) 2017, 11 Jul 2017, Edinburgh, UK.

Cartas Ayala, A., Aghaei, M., Grueter, C. , Ratnieks, F. & Reyes-Aldasoro, C. C. (2016). Behavior Analysis of Ants from Video Sequences. Paper presented at the Visual observation and analysis of Vertebrate And Insect Behavior 2016, 4 Dec 2016, Cancun, Mexico.

Hoffmann, E. & Reyes-Aldasoro, C. C. (2015). Automatic segmentation of centromeres, foci and delineation of chromosomes. Paper presented at the Medical Image Understanding and Analysis 2015, 15-7-2015 - 17-7-2015, University of Lincoln.

Huang, Y., Reyes-Aldasoro, C. C., Persoone, G. & Wlodkowic, D. (2015). Integrated microfluidic technology for sub-lethal and behavioral marine ecotoxicity biotests. Paper presented at the Bio-MEMS and Medical Microdevices II, 5-5-2015 - 6-5-2015, Hotel Alimara, Barcelona, Spain. doi: 10.1117/12.2180692

Mian, A. & Reyes-Aldasoro, C. C. (2015). Quantification of the Effects of Low Dose Radiation and its Impact on Cardiovascular Risks. Paper presented at the Quantification of the Effects of Low Dose Radiation and its Impact on Cardiovascular Risks.

Solis-Lemus, J. A., Huang, Y., Wlodkovic, D. & Reyes-Aldasoro, C. C. (2015). Microfluidic environment and tracking analysis for the observation of Artemia Franciscana. Paper presented at the 26th British Machine Vision Conference, 07-09-2015 - 10-09-2015, Swansea, UK.

Fonseca, J., Reyes-Aldasoro, C. C. & Wils, L. (2015). Three-dimensional quantification of the morphology and intragranular void ratio of a shelly carbonate sand. Paper presented at the Sixth International Symposium on Deformation Characteristics of Geomaterials, 15-11-2015 - 18-11-2015, Buenos Aires.

Blazakis, K. N., Reyes-Aldasoro, C. C., Styles, V. , Venkataraman, C. & Madzvamuse, A. (2014). An optimal control approach to cell tracking. Paper presented at the Inverse Problems from Theory to Applications Conference (IPTA2014), 26-08-2014 - 28-08-2014, Bristol, UK.

Kanthou, C., Dachs, G. U., Lefley, D. V. , Reyes-Aldasoro, C. C. & English, W. R. (2013). Endogenous VEGF isoform expression regulates tumour cell motility. Poster presented at the 2013 NCRI Cancer Conference, 03-11-2013 - 06-11-2013, Liverpool, UK.

Henry, K. M., Reyes-Aldasoro, C. C. & Renshaw, S. A. (2012). Exploring neutrophil behaviour in a zebrafish model of inflammation through the generation of novel parameters using MatLab algorithms. Paper presented at the European Congress of Immunology, 05-09-2012 - 08-09-2012, Glasgow, UK.

Griffiths, M. K., Reyes-Aldasoro, C. C. & Rodenberg, J. M. (2012). A Framework for Providing Research Applications as a Service Using the IOME Toolkit. Paper presented at the Digital Research 2012, Oxford, 10-09-2012 - 12-09-2012, Oxford, UK.

Kanthou, C., Ghareai, Z., Haagen, J. , Lunt, S. J., Reyes-Aldasoro, C. C., Doeer, W. & Tozer, G. M. (2012). Inhibition of angiogenesis in the mouse heart by ionizing radiation. Paper presented at the AACR 103rd Annual Meeting, 31-03-2012 - 04-04-2012, Chicago IL.

Bhalerao, A., Pase, L., Lieschke, G. J. , Renshaw, S. A. & Reyes-Aldasoro, C. C. (2012). Local affine texture tracking for serial registration of zebrafish images. Paper presented at the 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI), 02-05-2012-05-05-2012, Barcelona, Spain. doi: 10.1109/ISBI.2012.6235577

Reyes-Aldasoro, C. C., Henry, K. M. & Renshaw, S. A. (2012). Tracking neutrophils in zebrafish: the use of synthetic data sets. Paper presented at the Medical Image Understanding and Analysis, 09-07-2012 - 11-07-2012, Swansea, UK.

Reyes-Aldasoro, C. C., Björndahl, M. A., Akerman, S. , Ibrahim, J. & Tozer, G. M. (2011). An on-line chromatic and scale-space microvasculature-tracing analysis for transmitted light optical images. Paper presented at the Medical Image Understanding and Analysis, 14-07-2011 - 15-07-2011, London UK.

Reyes-Aldasoro, C. C., Williams, L. J., Akerman, S. , Kanthou, C. & Tozer, G. M. (2010). Segmentation and morphological analysis of microvessels in immunostained histological tumour sections. Paper presented at the Medical Image Understanding and Analysis, 06-07-2010 - 07-07-2010, Warwick, Uk.

Kanthou, C., Reyes-Aldasoro, C. C. & Tozer, G. M. (2010). Signaling interactions between RhoGTPase and cAMP/cGMP influence endothelial responses to the vascular disrupting agent combretastatin A4 phosphate. Paper presented at the 2010 NCRI Cancer Conference, 31-10-2010 - 03-11-2010, Liverpool, UK.

Williams, L. J., Fisher, M., Reyes-Aldasoro, C. C. , Kanthou, C. & Tozer, G. M. (2010). A critical role for RhoA-GTPase signaling in the tumour vascular disrupting action of combretastatin A4-phosphate in vivo. Paper presented at the 2010 NCRI Cancer Conference, 31-10-2010 - 03-11-2010, Liverpool, UK.

Reyes-Aldasoro, C. C., Björndahl, M. A., Ibrahim, J. , Akerman, S. & Tozer, G. M. (2010). A scale-space tracing algorithm for analysis of tumour blood vessel morphology from transmitted light optical images. Poster presented at the 2010 NCRI Cancer Conference, 31-10-2010 - 03-11-2010, Liverpool, UK.

Reyes-Aldasoro, C. C., Zhao, Y., Coca, D. , Billings, S. A., Kadirkamanathan, V., Tozer, G. M. & Renshaw, S. A. (2009). Analysis of immune cell function using in vivo cell shape analysis and tracking. Paper presented at the 4th IAPR International Conference on Pattern Recognition in Bioinformatics, 07-09-2009 - 09-09-2009, Sheffield, UK.

Griffiths, M. K., Reyes-Aldasoro, C. C., Savas, D. & Greenfield, T. (2009). IOME, A Toolkit for Distributed and Collaborative Computational Science and Engineering. Paper presented at the UK e-science All Hands Meeting, 07-12-2009 - 09-12-2009, Oxford, UK.

Akerman, S., Reyes-Aldasoro, C. C., Fisher, M. , Pettyjohn, K. L., Björndahl, M. A., Evans, H. & Tozer, G. M. (2009). Microflow of fluorescently labelled red blood cells in tumours expressing single isoforms of VEGF and their response to VEGF-R tyrosine kinase inhibition. Paper presented at the 2nd Micro and Nano Flows Conference (MNF2009), 01-09-2009 - 02-09-2009, London, Uk.

Williams, L., Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Kanthou, C. & Tozer, G. (2008). THE CONTRIBUTION OF THE RHO PROTEIN PATHWAY TO THE TUMOUR VASCULAR DISRUPTING ACTION OF CA-4-P. Paper presented at the 58th Meeting of the British Microcirculation Society, 1-2 April 2008, London, UK.

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Akerman, S. & Tozer, G. (2007). Red Blood Cell Tracking and Velocity Measurement with a Keyhole Model of Movement. Poster presented at the British Microcirculation Society Annual Scientific Meeting and Symposium, 2–3 April 2007, Belfast, UK.

Reyes-Aldasoro, C. C., Akerman, S. & Tozer, G. M. (2007). Measuring Red Blood Cell Velocity with a Keyhole Tracking Algorithm. Paper presented at the 11th Mediterranean Conference on Medical and Biological Engineering and Computing 2007, 26-06-2007 - 30-06-2007, Ljubljana, Slovenia. doi: 10.1007/978-3-540-73044-6_210

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Akerman, S. & Tozer, G. (2006). Measurement of Fluorescently Labelled Red Blood Cell Velocity Using Self-Organising Maps. Poster presented at the 56th Meeting of the British Microcirculation Society, 10-11 April 2006, Dundee, UK.

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Wilson, I., Prise, V. , Barber, P., Ameer-Beg, S., Vojnovic, B. & Tozer, G. (2005). Measurement of Vascular Permeability from Multiphoton Microscopy of Experimental Tumours. Poster presented at the NCRI Cancer Conference, 2-5 October 2005, Birmingham, UK.

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018, Wilson, I., Ameer-Beg, S. , Vojnovic, B. & Tozer, G. (2005). Analysis of the effects of tumour vascular targeting drugs on the vascular permeability of experimental tumours through multiphoton microscopy.. Paper presented at the Microcirculation 2005: A Transatlantic Microcirculation Conference, 11-13 September 2005, Durham, New Hampshire, USA.

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 & Aldeco, A. L. (2000). Image Segmentation and Compression using Neural Networks. Paper presented at the Advances in Artificial Perception and Robotics CIMAT, 2 Oct 2000, Guanajuato, Mexico.

Thesis

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2004). Multiresolution Volumetric Texture Segmentation. (Unpublished Doctoral thesis, University of Warwick)

Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (1994). Algorithm to Compute Reduced Costs on a Graph. (Unpublished Masters thesis, Imperial College of Science Technology and Medicine)

Working Paper

Ortega-Ruiz, M. A., Karabağ, C. ORCID: 0000-0003-4424-0471, García Garduño, V. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Morphological estimation of Cellularity on Neo-adjuvant treated breast cancer histological images (10.1101/2020.04.01.020719). .

Karabağ, C., Jones, M. L., Peddie, C. J. , Weston, A. E., Collinson, L. M. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2020). Geometric differences between nuclear envelopes of Wild-type and Chlamydia trachomatis-infected HeLa cells (10.1101/2020.04.02.021733). .

Ortega-Ruiz, M. A., Karabağ, C. ORCID: 0000-0003-4424-0471, Garduño, V. G. & Reyes-Aldasoro, C. C. ORCID: 0000-0002-9466-2018 (2011). Estimation of cellularity in tumours treated with Neoadjuvant therapy: A comparison of Machine Learning algorithms (10.1101/2020.04.09.034348). .

This list was generated on Sat Dec 3 04:55:58 2022 UTC.