City Research Online

Article

Abdelmageed, N., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hassanzadeh, O. & Konig-Ries, B.view all authors (2025). KG2Tables: A Domain-Specific Tabular Data Generator to Evaluate Semantic Table Interpretation Systems. Transactions on Graph Data and Knowledge (TGDK), 3(1), doi: 10.4230/TGDK.3.1.1

Herron, D., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Weyde, T. (2025). On the Potential of Logic and Reasoning in Neurosymbolic Systems using OWL-based Knowledge Graphs. Neurosymbolic Artificial Intelligence, 1, article number 29498732251320043. doi: 10.1177/29498732251320043

Bobed, C., Bobillo, F., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Mena, E. & Pan, J.view all authors (2024). Praedixi, Redegi, Cogitavi: Adaptive knowledge for resource-aware semantic reasoning. Expert Systems with Applications, 250, article number 123838. doi: 10.1016/j.eswa.2024.123838

Chen, J., Dong, H., Hastings, J. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Lopez, V., Monnin, P., Pesquita, C., Škoda, P. & Tamma, V.view all authors (2023). Knowledge Graphs for the Life Sciences: Recent Developments, Challenges and Opportunities. Transactions on Graph Data and Knowledge (TGDK), 1(1), doi: 10.4230/TGDK.1.1.5

Chen, J., He, Y., Geng, Y. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Dong, H. & Horrocks, I.view all authors (2023). Contextual Semantic Embeddings for Ontology Subsumption Prediction. World Wide Web, 26(5), pp. 2569-2591. doi: 10.1007/s11280-023-01169-9

Petricek, T., van den Burg, G. J. J., Nazábal, A. , Ceritli, T., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Williams, C. K. I.view all authors (2023). AI Assistants: A Framework for Semi-Automated Data Wrangling. IEEE Transactions on Knowledge and Data Engineering, 35(9), pp. 9295-9306. doi: 10.1109/tkde.2022.3222538

Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Horrocks, I. , Chen, X. & Myklebust, E. B.view all authors (2022). An assertion and alignment correction framework for large scale knowledge bases. Semantic Web, 14(1), pp. 29-53. doi: 10.3233/sw-210448

Matentzoglu, N., Balhoff, J. P., Bello, S. M. , Bizon, C., Brush, M., Callahan, T. J., Chute, C. G., Duncan, W. D., Evelo, C. T., Gabriel, D., Graybeal, J., Gray, A., Gyori, B. M., Haendel, M., Harmse, H., Harris, N. L., Harrow, I., Hegde, H. B., Hoyt, A. L., Hoyt, C. T., Jiao, D., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Jupp, S., Kim, H., Koehler, S., Liener, T., Long, Q., Malone, J., McLaughlin, J. A., McMurry, J. A., Moxon, S., Munoz-Torres, M. C., Osumi-Sutherland, D., Overton, J. A., Peters, B., Putman, T., Queralt-Rosinach, N., Shefchek, K., Solbrig, H., Thessen, A., Tudorache, T., Vasilevsky, N., Wagner, A. H. & Mungall, C. J.view all authors (2022). A Simple Standard for Sharing Ontological Mappings (SSSOM). Database-the journal of biological databases and curation, 2022, article number baac035. doi: 10.1093/database/baac035

Myklebust, E. B., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Chen, J. , Wolf, R. & Tollefsen, K. E.view all authors (2022). Prediction of Adverse Biological Effects of Chemicals Using Knowledge Graph Embeddings. Semantic Web, 13(3), pp. 299-338. doi: 10.3233/SW-222804

Chen, J., Hu, P., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Holter, O. M., Antonyrajah, D. & Horrocks, I.view all authors (2021). OWL2Vec*: Embedding of OWL Ontologies. Machine Learning, 110(7), pp. 1813-1845. doi: 10.1007/s10994-021-05997-6

Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Horrocks, I. , Antonyrajah, D., Hadian, A. & Lee, J.view all authors (2021). Augmenting Ontology Alignment by Semantic Embedding and Distant Supervision. Lecture Notes in Computer Science, 12731, doi: 10.1007/978-3-030-77385-4_23

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2020). LogMap family participation in the OAEI 2020. Proceedings of the 15th International Workshop on Ontology Matching (OM 2020), 2788, pp. 201-203.

Myklebust, E. B., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Chen, J. , Wolf, R. & Tollefsen, K. E.view all authors (2020). Ontology alignment in ecotoxicological effect prediction. Proceedings of the 15th International Workshop on Ontology Matching (OM 2020), 2788, pp. 233-234.

Harrow, I., Liener, T. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2020). Ontology matching for the laboratory analytics domain. Proceedings of the 15th International Workshop on Ontology Matching (OM 2020), 2788, pp. 237-238.

Nikooie Pour, M. A., Algergawy, A., Amini, R. , Faria, D., Fundulaki, I., Harrow, I., Hertling, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Jonquet, C., Karam, N., Khiat, A., Laadhar, A., Lambrix, P., Li, H., Li, Y., Hitzler, P., Paulheim, H., Pesquita, C., Saveta, T., Shvaiko, P., Splendiani, A., Thiéblin, E., Trojahn, C., Vataščinová, J., Yaman, B., Zamazal, O. & Zhou, L.view all authors (2020). Results of the ontology alignment evaluation initiative 2020. Proceedings of the 15th International Workshop on Ontology Matching (OM 2020), 2788, pp. 92-138.

Bill, E. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2020). Question embeddings for semantic answer type prediction. Proceedings of the SeMantic AnsweR Type prediction task (SMART) at ISWC 2020 Semantic Web Challenge, 2774, pp. 71-80.

Faria, D., Ferrara, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Montanelli, S. & Pesquita, C.view all authors (2020). Crowd-assessing quality in uncertain data linking datasets. The Knowledge Engineering Review, 35, article number e33. doi: 10.1017/s0269888920000363

Tyagi, S. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2020). LexMa: Tabular data to knowledge graph matching using lexical techniques. CEUR Workshop Proceedings, 2775, pp. 59-64.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hassanzadeh, O., Efthymiou, V. , Chen, J., Srinivas, K. & Cutrona, V.view all authors (2020). Results of SemTab 2020. CEUR Workshop Proceedings, 2775, pp. 1-8.

Klungre, V. N., Soylu, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kharlamov, E. & Giese, M.view all authors (2019). Query Extension Suggestions for Visual Query Systems Through Ontology Projection and Indexing. New Generation Computing, 37(4), pp. 361-392. doi: 10.1007/s00354-019-00071-1

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2019). Logmap family participation in the OAEI 2019. CEUR Workshop Proceedings, 2536, pp. 160-163.

Li, H., Dragisic, Z., Faria, D. , Ivanova, V., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Lambrix, P. & Pesquita, C.view all authors (2019). User validation in ontology alignment: functional assessment and impact. Knowledge Engineering Review, 34, article number e15. doi: 10.1017/s0269888919000080

Harrow, I., Balakrishnan, R., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Jupp, S., Lomax, J., Reed, J., Romacker, M., Senger, C., Splendiani, A., Wilson, J. & Woollard, P.view all authors (2019). Ontology mapping for semantically enabled applications. Drug Discovery Today, 24(10), pp. 2068-2075. doi: 10.1016/j.drudis.2019.05.020

Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Horrocks, I. (2019). Canonicalizing Knowledge Base Literals. Lecture Notes in Computer Science(11779), doi: 10.1007/978-3-030-30793-6_7

Algergawy, A., Faria, D., Ferrara, A. , Fundulaki, I., Harrow, I., Hertling, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Khiat, A., Lambrix, P., Li, H., Montanelli, S., Paulheim, H., Pesquita, C., Saveta, T., Shvaiko, P., Splendiani, A., Thiéblin, E., Trojahn, C., Vataščinová, J., Zamazal, O. & Zhou, L.view all authors (2019). Results of the ontology alignment evaluation initiative 2019. CEUR Workshop Proceedings, 2536, pp. 46-85.

Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Horrocks, I. & Sutton, C.view all authors (2019). ColNet: Embedding the Semantics of Web Tables for Column Type Prediction. Proceedings of the Thirty-Third AAAI Conference on Artificial Intelligence, 33, pp. 29-36. doi: 10.1609/aaai.v33i01.330129

Holter, O. M., Myklebust, E. B., Chen, J. & Jimenez-Ruiz, E.view all authors (2019). Embedding OWL ontologies with OWL2Vec. CEUR Workshop Proceedings, 2456, pp. 33-36.

Harrow, I., Liener, T. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2019). Ontology mapping for the laboratory analytics domain. 12th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences, 2849, pp. 145-146.

Agibetov, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Ondresik, M. , Solimando, A., Banerjee, I., Guerrini, G., Catalano, C. E., Oliveira, J. M., Patane, G., Reis, R. L. & Spagnuolo, M.view all authors (2018). Supporting shared hypothesis testing in the biomedical domain. Journal of Biomedical Semantics, 9(1), article number 9. doi: 10.1186/s13326-018-0177-x

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Saveta, T., Zamazal, O. , Hertling, S., Röder, M., Fundulaki, I., Ngomo, A. C. N., Sherif, M. A., Annane, A., Bellahsene, Z., Ben Yahia, S., Diallo, G., Faria, D., Kachroudi, M., Khiat, A., Lambrix, P., Li, H., Mackeprang, M., Mohammadi, M., Rybinski, M., Balasubramani, B. S. & Trojahn, C.view all authors (2018). Introducing the HOBBIT platform into the Ontology Alignment Evaluation campaign. CEUR Workshop Proceedings, 2288, pp. 49-60.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Cuenca Grau, B. & Cross, V. (2018). LogMap family participation in the OAEI2018. CEUR Workshop Proceedings, 2288, pp. 187-191.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Agibetov, A., Samwald, M. & Cross, V.view all authors (2018). We divide, you conquer: From large-scale ontology alignment to manageable subtasks with a lexical index and neural embeddings. CEUR Workshop Proceedings, 2288, pp. 13-24.

Soylu, A., Kharlamov, E., Zheleznyakov, D. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Giese, M., Skjaeveland, M. G., Hovland, D., Schlatte, R., Brandt, S., Lie, H. & Horrocks, I.view all authors (2018). OptiqueVQS: A visual query system over ontologies for industry. Semantic Web, 9(5), pp. 627-660. doi: 10.3233/sw-180293

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hovland, D., Slaughter, L. , Håndstad, T. & Waaler, A.view all authors (2018). On adopting Ontology Alignment techniques within the Phenotype Acquisition Process. CEUR Workshop Proceedings, 2042,

Shvaiko, P., Euzenat, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Cheatham, M. & Hassanzadeh, O.view all authors (2018). Ontology matching OM-2018. CEUR Workshop Proceedings, 2288, pp. i-ii.

Pinkel, C., Binnig, C., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kharlamov, E., May, W., Nikolov, A., Bastinos, A. S., Skjaeveland, M. G., Solimando, A., Taheriyan, M., Heupel, C. & Horrocks, I.view all authors (2018). RODI: Benchmarking Relational-to-Ontology Mapping Generation Quality. Semantic Web, 9(1), pp. 25-52. doi: 10.3233/sw-170268

Algergawy, A., Cheatham, M., Faria, D. , Ferrara, A., Fundulaki, I., Harrow, I., Hertling, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Khiat, A., Lambrix, P., Li, H., Montanelli, S., Paulheim, H., Pesquita, C., Saveta, T., Schmidt, D., Shvaiko, P., Splendiani, A., Thiéblin, E., Trojahn, C., Vataščinová, J., Zamazal, O. & Zhou, L.view all authors (2018). Results of the ontology alignment evaluation initiative 2018. CEUR Workshop Proceedings, 2288, pp. 76-116.

Harrow, I., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Splendiani, A. , Romacker, M., Woollard, P., Markel, S., Alam-Faruque, Y., Koch, M., Malone, J. & Waaler, A.view all authors (2017). Matching disease and phenotype ontologies in the ontology alignment evaluation initiative. Journal of Biomedical Statistics, 8(1), article number 55. doi: 10.1186/s13326-017-0162-9

Khiat, A., Yaman, B., Guerrini, G. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Karam, Nview all authors (2017). Boosting MultiFarm track with Turkish dataset. CEUR Workshop Proceedings, 2032, pp. 215-216.

Achichi, M., Cheatham, M., Dragisic, Z. , Euzenat, J., Faria, D., Ferrara, A., Flouris, G., Fundulaki, I., Harrow, I., Ivanova, V., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Kolthoff, K., Kuss, E., Lambrix, P., Leopold, H., Li, H., Meilicke, C., Mohammadi, M., Montanelli, S., Pesquita, C., Saveta, T., Shvaiko, P., Splendiani, A., Stuckenschmidt, H., Thiéblin, E., Todorov, K., Trojahn, C. & Zamazal, O.view all authors (2017). Results of the ontology alignment evaluation initiative 2017. CEUR Workshop Proceedings, 2032, pp. 61-113.

Pereira, S., Cross, V. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2017). On partitioning for ontology alignment. CEUR Workshop Proceedings, 1963,

Solimando, A., Jimenez-Ruiz, E. & Guerrini, G. (2017). Minimizing conservativity violations in ontology alignments: algorithms and evaluation. Knowledge and Information Systems, 51(3), pp. 775-819. doi: 10.1007/s10115-016-0983-3

Soylu, A., Giese, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kharlamov, E., Zheleznyakov, D. & Horrocks, I.view all authors (2017). Ontology-based end-user visual query formulation: Why, what, who, how, and which?. Universal Access in the Information Society, 16(2), pp. 435-467. doi: 10.1007/s10209-016-0465-0

Kharlamov, E., Hovland, D., Skjaeveland, M. G. , Bilidas, D., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Xiao, G., Soylu, A., Lanti, D., Rezk, M., Zheleznyakov, D., Giese, M., Lie, H., Ioannidis, Y., Kotidis, Y., Koubarakis, M. & Waaler, A.view all authors (2017). Ontology Based Data Access in Statoil. Journal of Web Semantics, 44, pp. 3-36. doi: 10.1016/j.websem.2017.05.005

Soylu, A., Giese, M., Schlatte, R. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Kharlamov, E., Ozcep, O., Neuenstadt, C. & Brandt, S.view all authors (2017). Querying industrial stream-temporal data: An ontology-based visual approach. Journal of Ambient Intelligence and Smart Environments, 9(1), pp. 77-95. doi: 10.3233/ais-160415

Jimenez-Ruiz, E., Grau, B. C. & Cross, V. (2017). LogMap family participation in the OAEI 2017. CEUR Workshop Proceedings, 2032,

Pinkel, C., Binnig, C., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kharlamov, E., Nikolov, A., Schwarte, A., Heupel, C. & Kraska, T.view all authors (2017). INCMap: A Journey towards ontology-based data integration. Lecture Notes in Informatics (LNI), Proceedings - Series of the Gesellschaft fur Informatik (GI), 265, pp. 145-164.

Berlanga, R., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Nebot, V. (2012). Exploring and linking biomedical resources through multidimensional semantic spaces. BMC Bioinformatics, 13(S1), S6-. doi: 10.1186/1471-2105-13-s1-s6

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Grau, B. C., Horrocks, I. & Berlanga, R.view all authors (2011). Logic-based assessment of the compatibility of UMLS ontology sources.. Journal of Biomedical Semantics, 2(Suppl 1), article number S2. doi: 10.1186/2041-1480-2-s1-s2

Berlanga, R., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Nebot, V. (2011). Building conceptual spaces for exploring and linking biomedical resources. CEUR Workshop Proceedings, 698,

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Grau, B. C., Berlanga, R. & Rebholz-Schuhmann, D.view all authors (2011). First steps in the logic-based assessment of post-composed phenotypic descriptions. CEUR Workshop Proceedings, 698,

Mesiti, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Sanz, I. , Berlanga-Llavori, R., Perlasca, P., Valentini, G. & Manset, D.view all authors (2009). XML-based approaches for the integration of heterogeneous bio-molecular data. BMC BIOINFORMATICS, 10(S12), S7-. doi: 10.1186/1471-2105-10-s12-s7

Jimeno-Yepes, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Berlanga-Llavori, R. & Rebholz-Schuhmann, D.view all authors (2009). Reuse of terminological resources for efficient ontological engineering in Life Sciences. BMC Bioinformatics, 10(S10), S4-. doi: 10.1186/1471-2105-10-s10-s4

Jimeno, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Lee, V. , Gaudan, S., Berlanga, R. & Rebholz-Schuhmann, D.view all authors (2008). Assessment of disease named entity recognition on a corpus of annotated sentences. BMC Bioinformatics, 9(S3), article number S3. doi: 10.1186/1471-2105-9-s3-s3

Book Section

Cremaschi, M., Siano, A., Avogadro, R. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Maurino, A.view all authors (2020). STILTool: a Semantic Table Interpretation evaLuation Tool. In: The Semantic Web: ESWC 2020 Satellite Events. Lecture Notes in Computer Science, 12124. . Cham, Switzerland: Springer. doi: 10.1007/978-3-030-62327-2_11

Conference or Workshop Item

Cotovio, P. G., Nunes, S., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Pesquita, C.view all authors (2026). Interpretable Context-Aware Models Improve Expert Validation in Ontology Matching. Paper presented at the 23rd European Semantic Web Conference (ESWC), 10-14 May 2026, Dubrovnik, Croatia.

Lushnei, S., Shumskyi, D., Shykula, S. , Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 & d'Avila Garcez, A.view all authors (2026). Large Language Models as Oracles for Ontology Alignment. Paper presented at the The 19th Conference of the European Chapter of the Association for Computational Linguistics (EACL), 24-29 Mar 2026, Rabat, Morocco.

Clay, A., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Madhyastha, P. ORCID: 0000-0002-4438-8161 (2025). Judge, Generator, Executioner: Utilizing an LLM for KBC. In: Joint Proceedings of the 3rd Workshop on Knowledge Base Construction from Pre-Trained Language Models and the 4th Challenge on Language Models for Knowledge Base Construction. 3rd Workshop on Knowledge Base Construction from Pre-Trained Language Models and the 4th Challenge on Language Models for Knowledge Base Construction, 2 Nov 2025, Nara, Japan.

Clay, A., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Madhyastha, P. ORCID: 0000-0002-4438-8161 (2025). Noise or Nuance: An Investigation Into Useful Information and Filtering For LLM Driven AKBC. In: Joint Proceedings of the 3rd Workshop on Knowledge Base Construction from Pre-Trained Language Models and the 4th Challenge on Language Models for Knowledge Base Construction (KBC-LM+LM-KBC 2025). 3rd Workshop on Knowledge Base Construction from Pre-Trained Language Models and the 4th Challenge on Language Models for Knowledge Base Construction (KBC-LM+LM-KBC 2025), 2 Nov 2025, Nara, Japan.

Clay, A. & Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2025). Information for Conversation Generation: Proposals Utilising Knowledge Graphs. In: Proceedings of the Special Session on Harmonising Generative AI and Semantic Web Technologies. 23rd International Semantic Web Conference, 11- 15 Nov 2024, Baltimore, Maryland, USA.

Teymurova, S., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599, Weyde, T. & Chen, J.view all authors (2025). OWL2Vec4OA: Tailoring Knowledge Graph Embeddings for Ontology Alignment. In: Tiwari, S., Villazón-Terrazas, B., Ortiz-Rodríguez, F. & Sahri, S.view all authors (Eds.), Knowledge Graphs and Semantic Web, KGSWC 2024. Sixth International Knowledge Graph and Semantic Web Conference, 11-13 Dec 2024, Paris, France.

Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2025). LogMap Family Participation in the OAEI 2024. In: CEUR Workshop Proceedings. 19th International Workshop on Ontology Matching, 11 Nov 2024, Baltimore, USA.

Pour, M. A. N., Algergawy, A., Blomqvist, E. , Buche, P., Chen, J., Cotovio, P. G., Coulet, A., Cufi, J., Dong, H., Faria, D., Ferraz, L., Hertling, S., He, Y., Horrocks, I., Ibanescu, L., Jain, S., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Kraus, F., Lambrix, P., Li, H., Li, Y., Monnin, P., Paulheim, H., Pesquita, C., Sharma, A., Shvaiko, P., Silva, M., Sousa, G., Trojahn, C., Vataščinová, J., Yaman, B., Zamazal, O. & Zhou, L.view all authors (2025). Results of the Ontology Alignment Evaluation Initiative 2024. In: CEUR Workshop Proceedings. 19th International Workshop on Ontology Matching, 11 Nov 2024, Baltimore, USA.

Teymurova, S., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599, Weyde, T. ORCID: 0000-0001-8028-9905 & Chen, J.view all authors (2025). Towards Tailoring Ontology Embeddings for Ontology Matching Tasks. In: CEUR Workshop Proceedings. 23rd International Semantic Web Conference (ISWC 2024), 11 Nov 2024, Baltimore, USA.

Yue, D. L. T. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2025). CitySTI 2024 System: Tabular Data to KG Matching using LLMs. In: CEUR Workshop Proceedings. 23rd International Semantic Web Conference (ISWC 2024), 11 Nov 2024, Baltimore, USA.

Kamburjan, E., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Zhou, B. & Waaler, A.view all authors (2024). Preface: Semantic Industrial Information Modelling. In: CEUR Workshop Proceedings. 3rd International Workshop on Semantic Industrial Information Modelling (SOFLIM2KG-SEMIIM 2024), 12 Nov 2024, Baltimore, USA.

Abdelmageed, N. ORCID: 0000-0002-1405-6860, Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hassanzadeh, O. ORCID: 0000-0001-5307-9857 & König-Ries, B. ORCID: 0000-0002-2382-9722view all authors (2024). KG2Tables: Your way to generate an STI benchmark for your domain. In: CEUR Workshop Proceedings. 23nd International Semantic Web Conference (ISWC 2024), 11-15 Nov 2024, Maryland, USA.

Ilkou, E. & Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2024). Towards a Knowledge Graph for Teaching Knowledge Graphs. In: CEUR Workshop Proceedings. The 23rd International Semantic Web Conference, 11-15 Nov 2024, Maryland, USA.

Clay, A. & Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2024). Information for Conversation Generation: Proposals Utilising Knowledge Graphs. Paper presented at the The 23rd International Semantic Web Conference, 11-15 Nov 2024, Maryland, USA.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2023). LogMap Family Participation in the OAEI 2023. In: OM 2023 Ontology Matching. 18th International Workshop on Ontology Matching, 7 Nov 2023, Athens, Greece.

Pour, M. A. N., Algergawy, A., Buche, P. , Castro, L. J., Chen, J., Coulet, A., Cufi, J., Dong, H., Fallatah, O., Faria, D., Fundulaki, I., Hertling, S., He, Y., Horrocks, I., Huschka, M., Ibanescu, L., Jain, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Lambrix, P., Li, H., Li, Y., Monnin, P., Nasr, E., Paulheim, H., Pesquita, C., Saveta, T., Shvaiko, P., Sousa, G., Trojahn, C., Vataščinová, J., Wu, M., Yaman, B., Zamazal, O. & Zhou, L.view all authors (2023). Results of the Ontology Alignment Evaluation Initiative 2023. In: Shvaiko, P., Euzenat, J. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (Eds.), OM 2023 Ontology Matching. 18th International Workshop on Ontology Matching, 7 Nov 2023, Athens, Greece.

Hassanzadeh, O., Abdelmageed, N., Efthymiou, V. , Chen, J., Cutrona, V., Hulsebos, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Khatiwada, A., Korini, K., Kruit, B., Sequeda, J. & Srinivas, K.view all authors (2023). Results of SemTab 2023. In: CEUR Workshop Proceedings. Semantic Web Challenge on Tabular Data to Knowledge Graph Matching (SemTab 2023), 6-10 Nov 2023, Athens, Greece.

He, Y., Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Dong, H. & Horrocks, I.view all authors (2023). Language Model Analysis for Ontology Subsumption Inference. In: Proceedings of the Annual Meeting of the Association for Computational Linguistics. 61st Annual Meeting of the Association for Computational Linguistics, 9-14 Jul 2023, Toronto, Canada.

Herron, D., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Weyde, T. ORCID: 0000-0001-8028-9905 (2023). On the Benefits of OWL-based Knowledge Graphs for Neural-Symbolic Systems. In: Proceedings of the 17th International Workshop on Neural-Symbolic Learning and Reasoning. 17th International Workshop on Neural-Symbolic Learning and Reasoning, 3-5 Jul 2023, La Certosa di Pontignano, Siena, Italy.

Rasouli, P., Yu, I. C. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2023). Interpreting Categorical Data Classifiers using Explanation-based Locality. In: IEEE International Conference on Data Mining Workshops, ICDMW. International Conference on Data Mining Workshops, ICDMW, 28 Nov - 01 Dec 2022, Orlando, FL, USA. doi: 10.1109/ICDMW58026.2022.00030

Efthymiou, V., Galhotra, S., Hassanzadeh, O. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Srinivas, K.view all authors (2023). 1st International Workshop on Tabular Data Analysis (TaDA). In: Joint Proceedings of Workshops at the 49th International Conference on Very Large Data Bases (VLDB 2023). 49th International Conference on Very Large Data Bases (VLDB 2023), 28 Aug - 1 Sep, Vancouver, Canada.

Pour, M., Algergawy, A., Buche, P. , Castro, L. J., Chen, J., Dong, H., Fallatah, O., Faria, D., Fundulaki, I., Hertling, S., He, Y., Horrocks, I., Huschka, M., Ibanescu, L., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Laadhar, A., Lambrix, P., Li, H., Li, Y., Michel, F., Nasr, E., Paulheim, H., Pesquita, C., Saveta, T., Shvaiko, P., Trojahn, C., Verhey, C., Wu, M., Yaman, B., Zamazal, O. & Zhou, L.view all authors (2022). Results of the Ontology Alignment Evaluation Initiative 2022. In: CEUR Workshop Proceedings. 17th International Workshop on Ontology Matching (OM 2022), 23 Oct 2022, Hangzhou, China.

Upson, R. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2022). Knowledge Graph Alignment as a Service. In: CEUR Workshop Proceedings. Proceedings of the ISWC 2022 Posters, Demos and Industry Tracks: From Novel Ideas to Industrial Practice, 23-27 Oct 2022, Hangzhou, China.

He, Y., Chen, J., Dong, H. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hadian, A. & Horrocks, I.view all authors (2022). Machine Learning-Friendly Biomedical Datasets for Equivalence and Subsumption Ontology Matching. In: The Semantic Web – ISWC 2022. 21st International Semantic Web Conference (ISWC-2022), 23-27 Oct 2022, Hangzhou, China. doi: 10.1007/978-3-031-19433-7_33

Zhou, D., Zhou, B., Zheng, Z. , Soylu, A., Cheng, G., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Kostylev, E. V. & Kharlamov, E.view all authors (2022). Ontology Reshaping for Knowledge Graph Construction: Applied on Bosch Welding Case. In: The Semantic Web – ISWC 2022. International Semantic Web Conference, 23-27 Oct 2022, Online. doi: 10.1007/978-3-031-19433-7_44

Zhou, B., Zheng, Z., Zhou, D. , Cheng, G., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Tran, T. K., Stepanova, D., Gad-Elrab, M. H., Nikolov, N., Soylu, A. & Kharlamov, E.view all authors (2022). The Data Value Quest: A Holistic Semantic Approach at Bosch. In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). The Semantic Web: ESWC 2022 Satellite Events. ESWC 2022, 29 May - 2 Jun 2022, Hersonissos, Crete, Greece. doi: 10.1007/978-3-031-11609-4_42

Zheng, Z., Zhou, B., Zhou, D. , Cheng, G., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Soylu, A. & Kharlamov, E.view all authors (2022). Query-Based Industrial Analytics over Knowledge Graphs with Ontology Reshaping. In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). ESWC 2022: The Semantic Web: ESWC 2022 Satellite Events, 29 May - 2 Jun 2022, Hersonissos, Crete, Greece. doi: 10.1007/978-3-031-11609-4_23

Cutrona, V., Chen, J., Efthymiou, V. , Hassanzadeh, O., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Sequeda, J., Srinivas, K., Abdelmageed, N., Hulsebos, M., Oliveira, D. & Pesquita, C.view all authors (2022). Results of SemTab 2021. In: Proceedings of the Semantic Web Challenge on Tabular Data to Knowledge Graph Matching. 20th International Semantic Web Conference, 24-28 Oct 2021, Virtual.

Kim, C. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2022). CitySAT: a System for the Semantic Answer Type Prediction Task. In: CEUR Workshop Proceedings. 20th International Semantic Web Conference (ISWC 2021), 26 Oct 2021, Online.

Zhou, D., Zhou, B., Zheng, Z. , Kostylev, E. V., Cheng, G., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Soylu, A. & Kharlamov, E.view all authors (2022). Enhancing Knowledge Graph Generation with Ontology Reshaping – Bosch Case. In: The Semantic Web: ESWC 2022 Satellite Events. The Semantic Web: ESWC 2022 Satellite Events, 29 May - 2 Jun 2022, Crete, Greece. doi: 10.1007/978-3-031-11609-4_45

d’Avila Garcez, A. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2022). Preface. In: CEUR Workshop Proceedings. 16th International Workshop on Neural-Symbolic Learning and Reasoning (NeSy), 28-30 Sep 2022, Windsor, UK.

Abdelmageed, N., Chen, J., Cutrona, V. , Efthymiou, V., Hassanzadeh, O., Hulsebos, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Sequeda, J. & Srinivas, K.view all authors (2022). Results of SemTab 2022. In: Semantic Web Challenge on Tabular Data to Knowledge Graph Matching. Semantic Web Challenge on Tabular Data to Knowledge Graph Matching (SemTab 2022), 23-27 Oct 2022, Virtual.

Shvaiko, P., Euzenat, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Hassanzadeh, O. & Trojahn, C.view all authors (2021). Ontology Matching OM-2021 : Proceedings of the ISWC Workshop. In: CEUR Workshop Proceedings. 16th International Workshop on Ontology Matching, 25 Oct 2021, Online.

d’Avila Garcez, A. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2021). Preface. In: Proceedings of the 15th International Workshop on Neural-Symbolic Learning and Reasoning as part of the 1st International Joint Conference on Learning & Reasoning (IJCLR 2021). 15th International Workshop on Neural-Symbolic Learning and Reasoning, 25-27 Oct 2021, Online.

Avogadro, R., Cremaschi, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Rula, A.view all authors (2021). A Framework for Quality Assessment of Semantic Annotations of Tabular Data. In: Lecture Notes in Computer Science. International Semantic Web Conference (ISWC), 24-28 Oct 2021, Online. doi: 10.1007/978-3-030-88361-4_31

Ritchie, A., Chen, J., Castro, L. J. , Rebholz-Schuhmann, D. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599view all authors (2021). Ontology Clustering with OWL2Vec*. In: CEUR Workshop Proceedings. Deep Learning meets Ontologies and Natural Language Processing (DeepOntoNLP2021), 6-10 Jun 2021, Online.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2021). LogMap Family Participation in the OAEI 2021. In: CEUR Workshop Proceedings. 16th International Workshop on Ontology Matching (OM 2021), 25 Oct 2021, Virtual.

Pour, M., Algergawy, A., Amardeilh, F. , Amini, R., Fallatah, O., Faria, D., Fundulaki, I., Harrow, I., Hertling, S., Hitzler, P., Huschka, M., Ibanescu, L., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Laadhar, A., Lambrix, P., Li, H., Li, Y., Michel, F., Nasr, E., Paulheim, H., Pesquita, C., Portisch, J., Roussey, C., Saveta, T., Shvaiko, P., Splendiani, A., Trojahn, C., Vataščinová, J., Yaman, B., Zamazal, O. & Zhou, L.view all authors (2021). Results of the Ontology Alignment Evaluation Initiative 2021. In: CEUR Workshop Proceedings 2021. 16th International Workshop on Ontology Matching, 25 Oct 2021, Virtual.

Cutrona, V., Bianchi, F., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Palmonari, M.view all authors (2020). Tough Tables: Carefully Evaluating Entity Linking for Tabular Data. In: The Semantic Web – ISWC 2020. The 19th International Semantic Web Conference, 2-6 Nov 2020, Athens, Greece. doi: 10.1007/978-3-030-62466-8_21

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Agibetov, A., Chen, J. , Samwald, M. & Cross, V.view all authors (2020). Dividing the Ontology Alignment Task with Semantic Embeddings and Logic-based Modules. Paper presented at the ECAI 2020, 8-12 Jun 2020, Santiago, Chile. doi: 10.3233/FAIA200167

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hassanzadeh, O., Efthymiou, V. , Chen, J. & Srinivas, K.view all authors (2020). SemTab 2019: Resources to Benchmark Tabular Data to Knowledge Graph Matching Systems. In: The Semantic Web. ESWC 2020. Extended Semantic Web Conference (ESWC), 31 May - 4 Jun 2020, Heraklion, Greece. doi: 10.1007/978-3-030-49461-2_30

Chen, J., Chen, X., Horrocks, I. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Myklebus, E. B.view all authors (2020). Correcting Knowledge Base Assertions. In: WWW '20: Proceedings of The Web Conference 2020. doi: 10.1145/3366423.3380226

Chen, J., Horrocks, I., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Sutton, C.view all authors (2019). Learning Semantic Annotations for Tabular Data. In: Kraus, S. (Ed.), Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence.

Geng, Y., Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Chen, H.view all authors (2019). Human-centric Transfer Learning Explanation via Knowledge Graph [Extended Abstract]. Paper presented at the AAAI-19 Workshop on Network Interpretability for Deep Learning, 27 - 28 January 2019, Honolulu, Hawaii, USA.

Myklebust, E., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Chen, J. , Wolf, R. & Tollefsen, K. E.view all authors (2019). Knowledge Graph Embedding for Ecotoxicological Effect Prediction. In: The Semantic Web – ISWC 2019: 18th International Semantic Web Conference, Auckland, New Zealand, October 26–30, 2019, Proceedings. doi: 10.1007/978-3-030-30793-6

Kharlamov, E., Skjaeveland, M., Hovland, D. , Mailis, T., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Xiao, G., Soylu, A., Horrocks, I. & Waaler, A.view all authors (2018). Finding Data Should be Easier than Finding Oil. In: 2018 IEEE International Conference on Big Data (Big Data).

Kharlamov, E., Brandt, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kotidis, Y., Lamparter, S., Mailis, T., Neuenstadt, C., Oezcep, O., Pinkel, C., Svingos, C., Zheleznyakov, D., Horrocks, I., Ioannidis, Y. & Moeller, R.view all authors (2016). Ontology-Based Integration of Streaming and Static Relational Data with Optique. In: SIGMOD '16 Proceedings of the 2016 International Conference on Management of Data. doi: 10.1145/2882903.2899385

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Berlanga, R., Sanz, I. , McClatchey, R., Danger, R., Manset, D., Paraire, J. & Rios, A.view all authors (2006). The management and integration of biomedical knowledge: Application in the health-e-child project (position paper). In: Meersman, R., Tari, Z. & Herrero, P. (Eds.), On the Move to Meaningful Internet Systems 2006: OTM 2006 Workshops.

Report

Bonatti, P. A., Domingue, J., Gentile, A. L. , Harth, A., Hartig, O., Hogan, A., Hose, K., Jiménez-Ruiz, E. ORCID: 0000-0002-9083-4599, McGuinness, D. L., Sun, C., Verborgh, R. & Wright, J.view all authors (2025). Towards Computer-Using Personal Agents. .

Myklebust, E. B., Jimenez-Ruiz, E., Chen, J. , Wolf, R. & Tollefsen, K. E.view all authors (2019). Enabling Semantic Data Access for Toxicological Risk Assessment. .

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Agibetov, A., Samwald, M. & Cross, V.view all authors (2018). Breaking-down the Ontology Alignment Task with a Lexical Index and Neural Embeddings. .

Meilicke, C., Sváb-Zamazal, O., Trojahn, C. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Aguirre, J-L., Stuckenschmidt, H. & Grau, B. C.view all authors (2012). Evaluating Ontology Matching Systems on Large, Multilingual and Real-world Test Cases. .