Article

Chen, J., He, Y., Geng, Y. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Dong, H. & Horrocks, I.view all authors (2023). Contextual Semantic Embeddings for Ontology Subsumption Prediction. World Wide Web,

Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Horrocks, I. , Chen, X. & Myklebust, E. B.view all authors (2022). An assertion and alignment correction framework for large scale knowledge bases. Semantic Web, 14(1), pp. 29-53. doi: 10.3233/SW-210448

Petricek, T., van den Burg, G. J. J., Nazábal, A. , Ceritli, T., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Williams, C. K. I.view all authors (2022). AI Assistants: A Framework for Semi-Automated Data Wrangling. IEEE Transactions on Knowledge and Data Engineering, doi: 10.1109/TKDE.2022.3222538

Matentzoglu, N., Balhoff, J. P., Bello, S. M. , Bizon, C., Brush, M., Callahan, T. J., Chute, C. G., Duncan, W. D., Evelo, C. T., Gabriel, D., Graybeal, J., Gray, A., Gyori, B. M., Haendel, M., Harmse, H., Harris, N. L., Harrow, I., Hegde, H. B., Hoyt, A. L., Hoyt, C. T., Jiao, D., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Jupp, S., Kim, H., Koehler, S., Liener, T., Long, Q., Malone, J., McLaughlin, J. A., McMurry, J. A., Moxon, S., Munoz-Torres, M. C., Osumi-Sutherland, D., Overton, J. A., Peters, B., Putman, T., Queralt-Rosinach, N., Shefchek, K., Solbrig, H., Thessen, A., Tudorache, T., Vasilevsky, N., Wagner, A. H. & Mungall, C. J.view all authors (2022). A Simple Standard for Sharing Ontological Mappings (SSSOM). Database-the journal of biological databases and curation, 2022, doi: 10.1093/database/baac035

Myklebust, E. B., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Chen, J. , Wolf, R. & Tollefsen, K. E.view all authors (2022). Prediction of Adverse Biological Effects of Chemicals Using Knowledge Graph Embeddings. Semantic Web, 13(3), pp. 299-338. doi: 10.3233/SW-222804

Chen, J., Hu, P., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Holter, O. M., Antonyrajah, D. & Horrocks, I.view all authors (2021). OWL2Vec*: Embedding of OWL Ontologies. Machine Learning, 110, pp. 1813-1845. doi: 10.1007/s10994-021-05997-6

Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Horrocks, I. , Antonyrajah, D., Hadian, A. & Lee, J.view all authors (2021). Augmenting Ontology Alignment by Semantic Embedding and Distant Supervision. Lecture Notes in Computer Science, 12731, doi: 10.1007/978-3-030-77385-4_23

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2020). LogMap family participation in the OAEI 2020. Proceedings of the 15th International Workshop on Ontology Matching (OM 2020), 2788, pp. 201-203.

Myklebust, E. B., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Chen, J. , Wolf, R. & Tollefsen, K. E.view all authors (2020). Ontology alignment in ecotoxicological effect prediction. Proceedings of the 15th International Workshop on Ontology Matching (OM 2020), 2788, pp. 233-234.

Harrow, I., Liener, T. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2020). Ontology matching for the laboratory analytics domain. Proceedings of the 15th International Workshop on Ontology Matching (OM 2020), 2788, pp. 237-238.

Nikooie Pour, M. A., Algergawy, A., Amini, R. , Faria, D., Fundulaki, I., Harrow, I., Hertling, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Jonquet, C., Karam, N., Khiat, A., Laadhar, A., Lambrix, P., Li, H., Li, Y., Hitzler, P., Paulheim, H., Pesquita, C., Saveta, T., Shvaiko, P., Splendiani, A., Thiéblin, E., Trojahn, C., Vataščinová, J., Yaman, B., Zamazal, O. & Zhou, L.view all authors (2020). Results of the ontology alignment evaluation initiative 2020. Proceedings of the 15th International Workshop on Ontology Matching (OM 2020), 2788, pp. 92-138.

Bill, E. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2020). Question embeddings for semantic answer type prediction. Proceedings of the SeMantic AnsweR Type prediction task (SMART) at ISWC 2020 Semantic Web Challenge, 2774, pp. 71-80.

Faria, D., Ferrara, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Montanelli, S. & Pesquita, C.view all authors (2020). Crowd-assessing quality in uncertain data linking datasets. The Knowledge Engineering Review, 35, e33. doi: 10.1017/s0269888920000363

Tyagi, S. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2020). LexMa: Tabular data to knowledge graph matching using lexical techniques. CEUR Workshop Proceedings, 2775, pp. 59-64.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hassanzadeh, O., Efthymiou, V. , Chen, J., Srinivas, K. & Cutrona, V.view all authors (2020). Results of SemTab 2020. CEUR Workshop Proceedings, 2775, pp. 1-8.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2019). Logmap family participation in the OAEI 2019. CEUR Workshop Proceedings, 2536, pp. 160-163.

Li, H., Dragisic, Z., Faria, D. , Ivanova, V., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Lambrix, P. & Pesquita, C.view all authors (2019). User validation in ontology alignment: functional assessment and impact. Knowledge Engineering Review, doi: 10.1017/S0269888919000080

Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Horrocks, I. (2019). Canonicalizing Knowledge Base Literals. Lecture Notes in Computer Science(11779), doi: 10.1007/978-3-030-30793-6_7

Algergawy, A., Faria, D., Ferrara, A. , Fundulaki, I., Harrow, I., Hertling, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Khiat, A., Lambrix, P., Li, H., Montanelli, S., Paulheim, H., Pesquita, C., Saveta, T., Shvaiko, P., Splendiani, A., Thiéblin, E., Trojahn, C., Vataščinová, J., Zamazal, O. & Zhou, L.view all authors (2019). Results of the ontology alignment evaluation initiative 2019. CEUR Workshop Proceedings, 2536, pp. 46-85.

Klungre, V. N., Soylu, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kharlamov, E. & Giese, M.view all authors (2019). Query Extension Suggestions for Visual Query Systems Through Ontology Projection and Indexing. New Generation Computing, doi: 10.1007/s00354-019-00071-1

Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Horrocks, I. & Sutton, C.view all authors (2019). ColNet: Embedding the Semantics of Web Tables for Column Type Prediction. Proceedings of the Thirty-Third AAAI Conference on Artificial Intelligence, 33, pp. 29-36. doi: 10.1609/aaai.v33i01.330129

Harrow, I., Balakrishnan, R., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Jupp, S., Lomax, J., Reed, J., Romacker, M., Senger, C., Splendiani, A., Wilson, J. & Woollard, P.view all authors (2019). Ontology mapping for semantically enabled applications. Drug Discovery Today, doi: 10.1016/j.drudis.2019.05.020

Holter, O. M., Myklebust, E. B., Chen, J. & Jimenez-Ruiz, E.view all authors (2019). Embedding OWL ontologies with OWL2Vec. CEUR Workshop Proceedings, 2456, pp. 33-36.

Harrow, I., Liener, T. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2019). Ontology mapping for the laboratory analytics domain. 12th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences, 2849, pp. 145-146.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Saveta, T., Zamazal, O. , Hertling, S., Röder, M., Fundulaki, I., Ngomo, A. C. N., Sherif, M. A., Annane, A., Bellahsene, Z., Ben Yahia, S., Diallo, G., Faria, D., Kachroudi, M., Khiat, A., Lambrix, P., Li, H., Mackeprang, M., Mohammadi, M., Rybinski, M., Balasubramani, B. S. & Trojahn, C.view all authors (2018). Introducing the HOBBIT platform into the Ontology Alignment Evaluation campaign. CEUR Workshop Proceedings, 2288, pp. 49-60.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Cuenca Grau, B. & Cross, V. (2018). LogMap family participation in the OAEI2018. CEUR Workshop Proceedings, 2288, pp. 187-191.

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Agibetov, A., Samwald, M. & Cross, V.view all authors (2018). We divide, you conquer: From large-scale ontology alignment to manageable subtasks with a lexical index and neural embeddings. CEUR Workshop Proceedings, 2288, pp. 13-24.

Soylu, A., Kharlamov, E., Zheleznyakov, D. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Giese, M., Skjaeveland, M. G., Hovland, D., Schlatte, R., Brandt, S., Lie, H. & Horrocks, I.view all authors (2018). OptiqueVQS: A visual query system over ontologies for industry. Semantic Web, 9(5), doi: 10.3233/SW-180293

Agibetov, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Ondresik, M. , Solimando, A., Banerjee, I., Guerrini, G., Catalano, C. E., Oliveira, J. M., Patane, G., Reis, R. L. & Spagnuolo, M.view all authors (2018). Supporting shared hypothesis testing in the biomedical domain. Journal of Biomedical Semantics, 9, 9. doi: 10.1186/s13326-018-0177-x

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hovland, D., Slaughter, L. , Håndstad, T. & Waaler, A.view all authors (2018). On adopting Ontology Alignment techniques within the Phenotype Acquisition Process. CEUR Workshop Proceedings, 2042,

Shvaiko, P., Euzenat, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Cheatham, M. & Hassanzadeh, O.view all authors (2018). Ontology matching OM-2018. CEUR Workshop Proceedings, 2288, pp. i-ii.

Pinkel, C., Binnig, C., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kharlamov, E., May, W., Nikolov, A., Bastinos, A. S., Skjaeveland, M. G., Solimando, A., Taheriyan, M., Heupel, C. & Horrocks, I.view all authors (2018). RODI: Benchmarking Relational-to-Ontology Mapping Generation Quality. Semantic Web, 9(1), pp. 25-52. doi: 10.3233/SW-170268

Algergawy, A., Cheatham, M., Faria, D. , Ferrara, A., Fundulaki, I., Harrow, I., Hertling, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Khiat, A., Lambrix, P., Li, H., Montanelli, S., Paulheim, H., Pesquita, C., Saveta, T., Schmidt, D., Shvaiko, P., Splendiani, A., Thiéblin, E., Trojahn, C., Vataščinová, J., Zamazal, O. & Zhou, L.view all authors (2018). Results of the ontology alignment evaluation initiative 2018. CEUR Workshop Proceedings, 2288, pp. 76-116.

Khiat, A., Yaman, B., Guerrini, G. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Karam, Nview all authors (2017). Boosting MultiFarm track with Turkish dataset. CEUR Workshop Proceedings, 2032, pp. 215-216.

Achichi, M., Cheatham, M., Dragisic, Z. , Euzenat, J., Faria, D., Ferrara, A., Flouris, G., Fundulaki, I., Harrow, I., Ivanova, V., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Kolthoff, K., Kuss, E., Lambrix, P., Leopold, H., Li, H., Meilicke, C., Mohammadi, M., Montanelli, S., Pesquita, C., Saveta, T., Shvaiko, P., Splendiani, A., Stuckenschmidt, H., Thiéblin, E., Todorov, K., Trojahn, C. & Zamazal, O.view all authors (2017). Results of the ontology alignment evaluation initiative 2017. CEUR Workshop Proceedings, 2032, pp. 61-113.

Harrow, I., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Splendiani, A. , Romacker, M., Woollard, P., Markel, S., Alam-Faruque, Y., Koch, M., Malone, J. & Waaler, A.view all authors (2017). Matching disease and phenotype ontologies in the ontology alignment evaluation initiative. Journal of Biomedical Statistics, 8, 55. doi: 10.1186/s13326-017-0162-9

Pereira, S., Cross, V. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2017). On partitioning for ontology alignment. CEUR Workshop Proceedings, 1963,

Soylu, A., Giese, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kharlamov, E., Zheleznyakov, D. & Horrocks, I.view all authors (2017). Ontology-based end-user visual query formulation: Why, what, who, how, and which?. Universal Access in the Information Society, 16(2), pp. 435-467. doi: 10.1007/s10209-016-0465-0

Kharlamov, E., Hovland, D., Skjaeveland, M. G. , Bilidas, D., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Xiao, G., Soylu, A., Lanti, D., Rezk, M., Zheleznyakov, D., Giese, M., Lie, H., Ioannidis, Y., Kotidis, Y., Koubarakis, M. & Waaler, A.view all authors (2017). Ontology Based Data Access in Statoil. Journal of Web Semantics, 44, pp. 3-36. doi: 10.1016/j.websem.2017.05.005

Soylu, A., Giese, M., Schlatte, R. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Kharlamov, E., Ozcep, O., Neuenstadt, C. & Brandt, S.view all authors (2017). Querying industrial stream-temporal data: An ontology-based visual approach. Journal of Ambient Intelligence and Smart Environments, 9(1), pp. 77-95. doi: 10.3233/AIS-160415

Jimenez-Ruiz, E., Grau, B. C. & Cross, V. (2017). LogMap family participation in the OAEI 2017. CEUR Workshop Proceedings, 2032,

Pinkel, C., Binnig, C., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kharlamov, E., Nikolov, A., Schwarte, A., Heupel, C. & Kraska, T.view all authors (2017). INCMap: A Journey towards ontology-based data integration. Lecture Notes in Informatics (LNI), Proceedings - Series of the Gesellschaft fur Informatik (GI), 265, pp. 145-164.

Solimando, A., Jimenez-Ruiz, E. & Guerrini, G. (2017). Minimizing conservativity violations in ontology alignments: algorithms and evaluation. Knowledge and Information Systems, 51(3), pp. 775-819. doi: 10.1007/s10115-016-0983-3

Berlanga, R., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Nebot, V. (2012). Exploring and linking biomedical resources through multidimensional semantic spaces. BMC Bioinformatics, 13(Supp 1), S6. doi: 10.1186/1471-2105-13-S1-S6

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Grau, B. C., Horrocks, I. & Berlanga, R.view all authors (2011). Logic-based assessment of the compatibility of UMLS ontology sources.. Journal of Biomedical Semantics, 2(Supp 1), S2. doi: 10.1186/2041-1480-2-S1-S2

Berlanga, R., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Nebot, V. (2011). Building conceptual spaces for exploring and linking biomedical resources. CEUR Workshop Proceedings, 698,

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Grau, B. C., Berlanga, R. & Rebholz-Schuhmann, D.view all authors (2011). First steps in the logic-based assessment of post-composed phenotypic descriptions. CEUR Workshop Proceedings, 698,

Jimeno-Yepes, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Berlanga-Llavori, R. & Rebholz-Schuhmann, D.view all authors (2009). Reuse of terminological resources for efficient ontological engineering in Life Sciences. BMC Bioinformatics, 10(Sup 10), S4. doi: 10.1186/1471-2105-10-S10-S4

Mesiti, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Sanz, I. , Berlanga-Llavori, R., Perlasca, P., Valentini, G. & Manset, D.view all authors (2009). XML-based approaches for the integration of heterogeneous bio-molecular data. BMC BIOINFORMATICS, 10, doi: 10.1186/1471-2105-10-S12-S7

Jimeno, A., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Lee, V. , Gaudan, S., Berlanga, R. & Rebholz-Schuhmann, D.view all authors (2008). Assessment of disease named entity recognition on a corpus of annotated sentences. BMC Bioinformatics, 9(Supp 3), S3. doi: 10.1186/1471-2105-9-S3-S3

Book Section

Cremaschi, M., Siano, A., Avogadro, R. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Maurino, A.view all authors (2020). STILTool: a Semantic Table Interpretation evaLuation Tool. In: The Semantic Web: ESWC 2020 Satellite Events. Lecture Notes in Computer Science, 12124. . Springer. doi: 10.1007/978-3-030-62327-2_11

Conference or Workshop Item

Rasouli, P., Yu, I. C. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2023). Interpreting Categorical Data Classifiers using Explanation-based Locality. IEEE International Conference on Data Mining Workshops, ICDMW, ISSN 2375-9232 doi: 10.1109/ICDMW58026.2022.00030

Pour, M., Algergawy, A., Buche, P. , Castro, L. J., Chen, J., Dong, H., Fallatah, O., Faria, D., Fundulaki, I., Hertling, S., He, Y., Horrocks, I., Huschka, M., Ibanescu, L., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Laadhar, A., Lambrix, P., Li, H., Li, Y., Michel, F., Nasr, E., Paulheim, H., Pesquita, C., Saveta, T., Shvaiko, P., Trojahn, C., Verhey, C., Wu, M., Yaman, B., Zamazal, O. & Zhou, L.view all authors (2022). Results of the Ontology Alignment Evaluation Initiative 2022. CEUR Workshop Proceedings, 3324, pp. 84-128. ISSN 1613-0073

Upson, R. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2022). Knowledge Graph Alignment as a Service. CEUR Workshop Proceedings, 3254, ISSN 1613-0073

He, Y., Chen, J., Dong, H. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hadian, A. & Horrocks, I.view all authors (2022). Machine Learning-Friendly Biomedical Datasets for Equivalence and Subsumption Ontology Matching. Paper presented at the 21st International Semantic Web Conference (ISWC-2022), 23-27 Oct 2022, Hangzhou, China. doi: 10.1007/978-3-031-19433-7_33

Zhou, D., Zhou, B., Zheng, Z. , Soylu, A., Cheng, G., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Kostylev, E. V. & Kharlamov, E.view all authors (2022). Ontology Reshaping for Knowledge Graph Construction: Applied on Bosch Welding Case. In: The Semantic Web – ISWC 2022. (pp. 770-790). Cham, Switzerland: Springer. ISBN 9783031194320 doi: 10.1007/978-3-031-19433-7_44

Zhou, B., Zheng, Z., Zhou, D. , Cheng, G., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Tran, T. K., Stepanova, D., Gad-Elrab, M. H., Nikolov, N., Soylu, A. & Kharlamov, E.view all authors (2022). The Data Value Quest: A Holistic Semantic Approach at Bosch. Paper presented at the The Semantic Web: ESWC 2022 Satellite Events. ESWC 2022, 29 May - 2 Jun 2022, Hersonissos, Crete, Greece. doi: 10.1007/978-3-031-11609-4_42

Zheng, Z., Zhou, B., Zhou, D. , Cheng, G., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Soylu, A. & Kharlamov, E.view all authors (2022). Query-Based Industrial Analytics over Knowledge Graphs with Ontology Reshaping. Paper presented at the ESWC 2022: The Semantic Web: ESWC 2022 Satellite Events, 29 May - 2 Jun 2022, Hersonissos, Crete, Greece. doi: 10.1007/978-3-031-11609-4_23

Cutrona, V., Chen, J., Efthymiou, V. , Hassanzadeh, O., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Sequeda, J., Srinivas, K., Abdelmageed, N., Hulsebos, M., Oliveira, D. & Pesquita, C.view all authors (2022). Results of SemTab 2021. Proceedings of the Semantic Web Challenge on Tabular Data to Knowledge Graph Matching, 3103, pp. 1-12. ISSN 1613-0073

Kim, C. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2022). CitySAT: a System for the Semantic Answer Type Prediction Task. CEUR Workshop Proceedings, 3119, pp. 77-88. ISSN 1613-0073

Zhou, D., Zhou, B., Zheng, Z. , Kostylev, E. V., Cheng, G., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Soylu, A. & Kharlamov, E.view all authors (2022). Enhancing Knowledge Graph Generation with Ontology Reshaping – Bosch Case. Paper presented at the The Semantic Web: ESWC 2022 Satellite Events, 29 May - 2 Jun 2022, Crete, Greece. doi: 10.1007/978-3-031-11609-4_45

d’Avila Garcez, A. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2022). Preface. CEUR Workshop Proceedings, 3212, ISSN 1613-0073

Abdelmageed, N., Chen, J., Cutrona, V. , Efthymiou, V., Hassanzadeh, O., Hulsebos, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Sequeda, J. & Srinivas, K.view all authors (2022). Results of SemTab 2022. Semantic Web Challenge on Tabular Data to Knowledge Graph Matching, 3320, ISSN 1613-0073

Shvaiko, P., Euzenat, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Hassanzadeh, O. & Trojahn, C.view all authors (2021). Ontology Matching OM-2021 : Proceedings of the ISWC Workshop. CEUR Workshop Proceedings, 3063, pp. i-ii. ISSN 1613-0073

d’Avila Garcez, A. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2021). Preface. CEUR Workshop Proceedings, 2986, ISSN 1613-0073

Avogadro, R., Cremaschi, M., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Rula, A.view all authors (2021). A Framework for Quality Assessment of Semantic Annotations of Tabular Data. Lecture Notes in Computer Science, 12922, ISSN 0302-9743 doi: 10.1007/978-3-030-88361-4_31

Ritchie, A., Chen, J., Castro, L. J. , Rebholz-Schuhmann, D. & Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599view all authors (2021). Ontology Clustering with OWL2Vec*. CEUR Workshop Proceedings, 2918, pp. 54-61. ISSN 1613-0073

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 (2021). LogMap Family Participation in the OAEI 2021. CEUR Workshop Proceedings, 3063, pp. 175-177. ISSN 1613-0073

Pour, M., Algergawy, A., Amardeilh, F. , Amini, R., Fallatah, O., Faria, D., Fundulaki, I., Harrow, I., Hertling, S., Hitzler, P., Huschka, M., Ibanescu, L., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Karam, N., Laadhar, A., Lambrix, P., Li, H., Li, Y., Michel, F., Nasr, E., Paulheim, H., Pesquita, C., Portisch, J., Roussey, C., Saveta, T., Shvaiko, P., Splendiani, A., Trojahn, C., Vataščinová, J., Yaman, B., Zamazal, O. & Zhou, L.view all authors (2021). Results of the Ontology Alignment Evaluation Initiative 2021. CEUR Workshop Proceedings 2021, 3063, pp. 62-108. ISSN 1613-0073

Cutrona, V., Bianchi, F., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Palmonari, M.view all authors (2020). Tough Tables: Carefully Evaluating Entity Linking for Tabular Data. In: The Semantic Web – ISWC 2020. Lecture Notes in Computer Science. (pp. 328-343). Springer International Publishing. ISBN 978-3-030-62465-1 doi: 10.1007/978-3-030-62466-8_21

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Hassanzadeh, O., Efthymiou, V. , Chen, J. & Srinivas, K.view all authors (2020). SemTab 2019: Resources to Benchmark Tabular Data to Knowledge Graph Matching Systems. In: The Semantic Web. ESWC 2020. Lecture Notes in Computer Science. (pp. 514-530). Cham: Springer. ISBN 978-3-030-49460-5 doi: 10.1007/978-3-030-49461-2_30

Chen, J., Chen, X., Horrocks, I. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Myklebus, E. B.view all authors (2020). Correcting Knowledge Base Assertions. In: WWW '20: Proceedings of The Web Conference 2020. (pp. 1537-1547). New York, NY, United States: Association for Computing Machinery. ISBN 978-1-4503-7023-3 doi: 10.1145/3366423.3380226

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Agibetov, A., Chen, J. , Samwald, M. & Cross, V.view all authors (2020). Dividing the Ontology Alignment Task with Semantic Embeddings and Logic-based Modules. Paper presented at the ECAI 2020, 8-12 Jun 2020, Santiago, Chile. doi: 10.3233/FAIA200167

Chen, J., Horrocks, I., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Sutton, C.view all authors (2019). Learning Semantic Annotations for Tabular Data. In: Kraus, S. (Ed.), Proceedings of the Twenty-Eighth International Joint Conference on Artificial Intelligence. (pp. 2088-2094). International Joint Conferences on Artifical Intelligence (IJCAI). ISBN 978-0-9992411-4-1

Geng, Y., Chen, J., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 & Chen, H.view all authors (2019). Human-centric Transfer Learning Explanation via Knowledge Graph [Extended Abstract]. Paper presented at the AAAI-19 Workshop on Network Interpretability for Deep Learning, 27 - 28 January 2019, Honolulu, Hawaii, USA.

Myklebust, E., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Chen, J. , Wolf, R. & Tollefsen, K. E.view all authors (2019). Knowledge Graph Embedding for Ecotoxicological Effect Prediction. In: The Semantic Web – ISWC 2019: 18th International Semantic Web Conference, Auckland, New Zealand, October 26–30, 2019, Proceedings. Lecture Notes in Computer Science, 11779 (11778). (pp. 490-506). Cham: Springer. ISBN 978-3-030-30792-9 doi: 10.1007/978-3-030-30793-6

Kharlamov, E., Skjaeveland, M., Hovland, D. , Mailis, T., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Xiao, G., Soylu, A., Horrocks, I. & Waaler, A.view all authors (2018). Finding Data Should be Easier than Finding Oil. In: 2018 IEEE International Conference on Big Data (Big Data). . UNSPECIFIED. ISBN 978-1-5386-5035-6

Kharlamov, E., Brandt, S., Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599 , Kotidis, Y., Lamparter, S., Mailis, T., Neuenstadt, C., Oezcep, O., Pinkel, C., Svingos, C., Zheleznyakov, D., Horrocks, I., Ioannidis, Y. & Moeller, R.view all authors (2016). Ontology-Based Integration of Streaming and Static Relational Data with Optique. In: SIGMOD '16 Proceedings of the 2016 International Conference on Management of Data. (pp. 2109-2112). New York: ACM. ISBN 978-1-4503-3531-7 doi: 10.1145/2882903.2899385

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Berlanga, R., Sanz, I. , McClatchey, R., Danger, R., Manset, D., Paraire, J. & Rios, A.view all authors (2006). The management and integration of biomedical knowledge: Application in the health-e-child project (position paper). In: Meersman, R., Tari, Z. & Herrero, P. (Eds.), On the Move to Meaningful Internet Systems 2006: OTM 2006 Workshops. Lecture Notes in Computer Science, 4278. (pp. 1062-1067). Berlin: Springer. ISBN 978-3-540-48273-4

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Myklebust, E. B., Jimenez-Ruiz, E., Chen, J. , Wolf, R. & Tollefsen, K. E.view all authors (2019). Enabling Semantic Data Access for Toxicological Risk Assessment. .

Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Agibetov, A., Samwald, M. & Cross, V.view all authors (2018). Breaking-down the Ontology Alignment Task with a Lexical Index and Neural Embeddings. .

Meilicke, C., Sváb-Zamazal, O., Trojahn, C. , Jimenez-Ruiz, E. ORCID: 0000-0002-9083-4599, Aguirre, J-L., Stuckenschmidt, H. & Grau, B. C.view all authors (2012). Evaluating Ontology Matching Systems on Large, Multilingual and Real-world Test Cases. .