City Research Online

Article

Colyer, B., Bak, M., Basanta, D. & Noble, R. ORCID: 0000-0002-8057-4252view all authors (2024). A seven-step guide to spatial, agent-based modelling of tumour evolution. Evolutionary Applications: evolutionary approaches to environmental, biomedical and socio-economic issues, 17(5), article number e13687. doi: 10.1111/eva.13687

West, J. D., Adler, F., Gallaher, J. , Strobl, M., Brady-Nicholls, R., Brown, J., Roberson-Tessi, M., Kim, E., Noble, R. ORCID: 0000-0002-8057-4252, Viossat, Y., Basanta, D. & Anderson, A.view all authors (2023). A survey of open questions in adaptive therapy: Bridging mathematics and clinical translation. Elife, 12, article number e84263. doi: 10.7554/elife.84263

Lemant, J., Le Sueur, C., Manojlović, V. & Noble, R. ORCID: 0000-0002-8057-4252view all authors (2022). Robust, Universal Tree Balance Indices. Systematic Biology, 71(5), pp. 1210-1224. doi: 10.1093/sysbio/syac027

Noble, R. ORCID: 0000-0002-8057-4252, Burri, D., Le Sueur, C. , Lemant, J., Viossat, Y., Kather, J. N. & Beerenwinkel, N.view all authors (2022). Spatial structure governs the mode of tumour evolution. Nature Ecology and Evolution, 6(2), pp. 207-217. doi: 10.1038/s41559-021-01615-9

Mosca, M., Hermange, G., Tisserand, A. , Noble, R. J. ORCID: 0000-0002-8057-4252, Marzac, C., Marty, C., Le Sueur, C., Campario, H., Vertenoeil, G., El-Khoury, M., Catelain, C., Rameau, P., Gella, C., Lenglet, J., Casadevall, N., Favier, R., Solary, E., Cassinat, B., Kiladjian, J-J., Constantinescu, S. N., Pasquier, F., Hochberg, M. E., Raslova, H., Villeval, J-L., Girodon, F., Vainchenker, W., Cournède, P-H. & Plo, I.view all authors (2021). Inferring the dynamic of mutated hematopoietic stem and progenitor cells induced by IFNα in myeloproliferative neoplasms. Blood, 138(22), pp. 2231-2243. doi: 10.1182/blood.2021010986

Kuosmanen, T., Cairns, J. G., Noble, R. ORCID: 0000-0002-8057-4252 , Beerenwinkel, N., Mononen, T. & Mustonen, V.view all authors (2021). Drug-induced resistance evolution necessitates less aggressive treatment. PLoS Computational Biology, 17(9), article number e1009418. doi: 10.1371/journal.pcbi.1009418

Noble, R. ORCID: 0000-0002-8057-4252, Walther, V., Roumestand, C. , Hochberg, M. E., Hibner, U. & Lassus, P.view all authors (2021). Paracrine behaviors arbitrate parasite-like interactions between tumor subclones. Frontiers Ecology and Evolution, 9, article number 675638. doi: 10.3389/fevo.2021.675638

Viossat, Y. & Noble, R. ORCID: 0000-0002-8057-4252 (2021). A theoretical analysis of tumour containment. Nature Ecology and Evolution, 5(6), pp. 826-835. doi: 10.1038/s41559-021-01428-w

Noble, R. ORCID: 0000-0002-8057-4252, Burley, J. T., Le Sueur, C. & Hochberg, M. E.view all authors (2020). When, why and how tumour clonal diversity predicts survival. Evolutionary Applications, 13(7), pp. 1558-1568. doi: 10.1111/eva.13057

Dujon, A. M., Aktipis, A., Alix‐Panabières, C. , Amend, S. R., Boddy, A. M., Brown, J. S., Capp, J-P., DeGregori, J., Ewald, P., Gatenby, R., Gerlinger, M., Giraudeau, M., Hamede, R. R., Hansen, E., Kareva, I., Maley, C. C., Marusyk, A., McGranahan, N., Metzger, M. J., Nedelcu, A. M., Noble, R. ORCID: 0000-0002-8057-4252, Nunney, L., Pienta, K. J., Polyak, K., Pujol, P., Read, A. F., Roche, B., Sebens, S., Solary, E., Staňková, K., Swain Ewald, H., Thomas, F. & Ujvari, B.view all authors (2020). Identifying key questions in the ecology and evolution of cancer. Evolutionary Applications, 14(4), pp. 877-892. doi: 10.1111/eva.13190

Bacevic, K., Noble, R. ORCID: 0000-0002-8057-4252, Soffar, A. , Ammar, O. W., Boszonyik, B., Prieto, S., Vincent, C., Hochberg, M. E., Krasinska, L. & Fisher, D.view all authors (2017). Spatial competition constrains resistance to targeted cancer therapy. Nature Communications, 8(1), article number 1995. doi: 10.1038/s41467-017-01516-1

Vasse, M., Noble, R. ORCID: 0000-0002-8057-4252, Akhmetzhanov, A. R. , Torres-Barceló, C., Gurney, J., Benateau, S., Gougat-Barbera, C., Kaltz, O. & Hochberg, M. E.view all authors (2017). Antibiotic stress selects against cooperation in the pathogenic bacterium Pseudomonas aeruginosa. Proceedings of the National Academy of Sciences of the United States of America (PNAS) ISSN 1091-6490, 114(3), pp. 546-551. doi: 10.1073/pnas.1612522114

Hochberg, M. E. & Noble, R. ORCID: 0000-0002-8057-4252 (2017). A framework for how environment contributes to cancer risk. Ecology Letters, 20(2), pp. 117-134. doi: 10.1111/ele.12726

Noble, R. ORCID: 0000-0002-8057-4252, Kaltz, O., Nunney, L. & Hochberg, M. E.view all authors (2016). Overestimating the Role of Environment in Cancers. Cancer Prevention Research, 9(10), pp. 773-776. doi: 10.1158/1940-6207.capr-16-0126

Noble, R. ORCID: 0000-0002-8057-4252, Kaltz, O. & Hochberg, M. E. (2015). Peto's paradox and human cancers. Philosophical Transactions of the Royal Society B: Biological Sciences, 370(1673), article number 20150104. doi: 10.1098/rstb.2015.0104

Noble, R. ORCID: 0000-0002-8057-4252, Christodoulou, Z., Kyes, S. , Pinches, R., Newbold, C. & Recker, M.view all authors (2013). The antigenic switching network of Plasmodium falciparum and its implications for the immuno-epidemiology of malaria. Elife, 2(2), article number e01074. doi: 10.7554/elife.01074

Fastman, Y., Noble, R. ORCID: 0000-0002-8057-4252, Recker, M. & Dzikowski, R.view all authors (2012). Erasing the epigenetic memory and beginning to switch--the onset of antigenic switching of var genes in Plasmodium falciparum. PLoS One, 7(3), article number e34168. doi: 10.1371/journal.pone.0034168

Noble, R. ORCID: 0000-0002-8057-4252 & Recker, M. (2012). A statistically rigorous method for determining antigenic switching networks. PLoS One, 7(6), article number e39335. doi: 10.1371/journal.pone.0039335

Other

Stein, A., Kizhuttil, R., Bak, M. & Noble, R. ORCID: 0000-0002-8057-4252view all authors (2023). Selective sweep probabilities in spatially expanding populations. doi: 10.1101/2023.11.27.568915

Patil, S., Viossat, Y. & Noble, R. J. ORCID: 0000-0002-8057-4252 (2023). Preventing evolutionary rescue in cancer. doi: 10.1101/2023.11.22.568336

Colyer, B., Bak, M., Basanta, D. & Noble, R. ORCID: 0000-0002-8057-4252view all authors (2023). A seven-step guide to spatial, agent-based modelling of tumour evolution. doi: 10.48550/arXiv.2311.03569

Noble, R. ORCID: 0000-0002-8057-4252 & Verity, K. (2023). A new universal system of tree shape indices. doi: 10.1101/2023.07.17.549219

Hochberg, M. E., Noble, R. ORCID: 0000-0002-8057-4252 & Braude, S. (2016). A Hypothesis to Explain Cancers in Confined Colonies of Naked Mole Rats. doi: 10.1101/079012

Bak, M., Colyer, B., Manojlovic, V. & Noble, R. ORCID: 0000-0002-8057-4252view all authors Warlock: an automated computational workflow for simulating spatially structured tumour evolution. doi: 10.48550/arXiv.2301.07808

Working Paper

Noble, R. ORCID: 0000-0002-8057-4252, Kaltz, O. & Hochberg, M. E. (2015). Statistical interpretations and new findings on Variation in Cancer Risk Among Tissues. .